Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCSR_LATE_UP.V1_UP
Enrichment Score (ES)-0.57076204
Normalized Enrichment Score (NES)-1.242992
Nominal p-value0.05372807
FDR q-value0.42508757
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_LATE_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]254.9630.0198No
2TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]424.9050.0396No
3PARP11poly(ADP-ribose) polymerase family member 11 [Source:HGNC Symbol;Acc:HGNC:1186]2783.8910.0493No
4MT2Ametallothionein 2A [Source:HGNC Symbol;Acc:HGNC:7406]3223.7130.0634No
5CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]5153.1670.0713No
6IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]5693.0690.0825No
7EML1EMAP like 1 [Source:HGNC Symbol;Acc:HGNC:3330]6432.9140.0925No
8MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]10582.2600.0906No
9TRPC4transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]11992.0600.0953No
10MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]12402.0160.1026No
11NMBneuromedin B [Source:HGNC Symbol;Acc:HGNC:7842]14391.8020.1046No
12GTF3C6general transcription factor IIIC subunit 6 [Source:HGNC Symbol;Acc:HGNC:20872]14981.8020.1105No
13WSB2WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]15911.7670.1153No
14ASB6ankyrin repeat and SOCS box containing 6 [Source:HGNC Symbol;Acc:HGNC:17181]18571.5330.1144No
15EEF1E1eukaryotic translation elongation factor 1 epsilon 1 [Source:HGNC Symbol;Acc:HGNC:3212]19981.4240.1165No
16FARSAphenylalanyl-tRNA synthetase subunit alpha [Source:HGNC Symbol;Acc:HGNC:3592]20341.4010.1213No
17RPF2ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]22581.2600.1205No
18EIF5Aeukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:HGNC:3300]25261.1300.1179No
19MT1Bmetallothionein 1B [Source:HGNC Symbol;Acc:HGNC:7394]26211.0790.1198No
20HYPKhuntingtin interacting protein K [Source:HGNC Symbol;Acc:HGNC:18418]28870.9500.1166No
21TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]29240.9310.1194No
22PSMD14proteasome 26S subunit, non-ATPase 14 [Source:HGNC Symbol;Acc:HGNC:16889]29470.9200.1226No
23PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]33310.7690.1154No
24TPM2tropomyosin 2 [Source:HGNC Symbol;Acc:HGNC:12011]34060.7390.1165No
25AHSA1activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]36230.6600.1133No
26JPT1Jupiter microtubule associated homolog 1 [Source:HGNC Symbol;Acc:HGNC:14569]36270.6590.1160No
27IMP4IMP U3 small nucleolar ribonucleoprotein 4 [Source:HGNC Symbol;Acc:HGNC:30856]36570.6500.1179No
28CYP4B1cytochrome P450 family 4 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2644]36760.6430.1200No
29ST3GAL4ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]37330.6250.1211No
30FARSBphenylalanyl-tRNA synthetase subunit beta [Source:HGNC Symbol;Acc:HGNC:17800]39890.5390.1164No
31EIF3Beukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]41100.4990.1152No
32MAPRE1microtubule associated protein RP/EB family member 1 [Source:HGNC Symbol;Acc:HGNC:6890]41810.4760.1153No
33PSMC3proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549]42400.4490.1156No
34PSMD2proteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]44420.3830.1117No
35ELOCelongin C [Source:HGNC Symbol;Acc:HGNC:11617]45630.3500.1099No
36SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]45940.3410.1105No
37DNAJB11DnaJ heat shock protein family (Hsp40) member B11 [Source:HGNC Symbol;Acc:HGNC:14889]46240.3340.1111No
38MYH1myosin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:7567]48820.2650.1052No
39DRAP1DR1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:3019]49060.2590.1057No
40SRMspermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]50090.2260.1038No
41HERC4HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:HGNC Symbol;Acc:HGNC:24521]56840.1440.0862No
42LYARLy1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]60680.0210.0759No
43NETO2neuropilin and tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:14644]71150.0000.0476No
44GREM2gremlin 2, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:17655]81070.0000.0207No
45CDH2cadherin 2 [Source:HGNC Symbol;Acc:HGNC:1759]93120.000-0.0119No
46SSTR1somatostatin receptor 1 [Source:HGNC Symbol;Acc:HGNC:11330]115710.000-0.0730No
47IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]117230.000-0.0771No
48DCBLD1discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]120610.000-0.0862No
49TMEM130transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]133510.000-0.1212No
50KISS1KiSS-1 metastasis suppressor [Source:HGNC Symbol;Acc:HGNC:6341]142880.000-0.1465No
51MBL2mannose binding lectin 2 [Source:HGNC Symbol;Acc:HGNC:6922]154980.000-0.1792No
52BEX1brain expressed X-linked 1 [Source:HGNC Symbol;Acc:HGNC:1036]164960.000-0.2062No
53TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]170720.000-0.2218No
54SERPINB7serpin family B member 7 [Source:HGNC Symbol;Acc:HGNC:13902]177740.000-0.2408No
55CXCL12C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]189180.000-0.2718No
56METMET proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:7029]189390.000-0.2723No
57MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]191170.000-0.2771No
58NKX2-1NK2 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:11825]192090.000-0.2796No
59CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]194630.000-0.2864No
60SAMD11sterile alpha motif domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28706]204020.000-0.3118No
61ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]233600.000-0.3919No
62TRPC3transient receptor potential cation channel subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:12335]247220.000-0.4287No
63SLC16A5solute carrier family 16 member 5 [Source:HGNC Symbol;Acc:HGNC:10926]262120.000-0.4691No
64C19orf48chromosome 19 open reading frame 48 [Source:HGNC Symbol;Acc:HGNC:29667]267710.000-0.4842No
65KRT25keratin 25 [Source:HGNC Symbol;Acc:HGNC:30839]267980.000-0.4849No
66KRT18keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]268470.000-0.4862No
67SNORD22small nucleolar RNA, C/D box 22 [Source:HGNC Symbol;Acc:HGNC:10145]272190.000-0.4962No
68NUP88nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]28186-0.004-0.5224No
69CBFBcore-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]28388-0.063-0.5276No
70ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]28539-0.106-0.5312No
71PRMT5protein arginine methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:10894]28544-0.108-0.5308No
72SMSspermine synthase [Source:HGNC Symbol;Acc:HGNC:11123]28711-0.158-0.5347No
73PPP5Cprotein phosphatase 5 catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9322]28938-0.220-0.5399No
74ARHGEF1Rho guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:681]28939-0.220-0.5390No
75PDLIM5PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468]29193-0.286-0.5447No
76CIAPIN1cytokine induced apoptosis inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:28050]29240-0.299-0.5447No
77UTP18UTP18 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]29870-0.445-0.5599No
78TEX30testis expressed 30 [Source:HGNC Symbol;Acc:HGNC:25188]29899-0.455-0.5588No
79NUDCnuclear distribution C, dynein complex regulator [Source:HGNC Symbol;Acc:HGNC:8045]29956-0.469-0.5583No
80FKBP1AFKBP prolyl isomerase 1A [Source:HGNC Symbol;Acc:HGNC:3711]29999-0.482-0.5575No
81HAUS2HAUS augmin like complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25530]30138-0.521-0.5591No
82NOC2LNOC2 like nucleolar associated transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:24517]30284-0.563-0.5607No
83RAD18RAD18 E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:18278]30484-0.602-0.5636No
84CDC7cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]30627-0.640-0.5648No
85TUBA4Atubulin alpha 4a [Source:HGNC Symbol;Acc:HGNC:12407]30848-0.693-0.5679Yes
86YIPF3Yip1 domain family member 3 [Source:HGNC Symbol;Acc:HGNC:21023]30858-0.697-0.5653Yes
87KIFBPkinesin family binding protein [Source:HGNC Symbol;Acc:HGNC:23419]31054-0.767-0.5674Yes
88NUDCD1NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]31074-0.775-0.5647Yes
89POLE3DNA polymerase epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:13546]31100-0.781-0.5622Yes
90PREBprolactin regulatory element binding [Source:HGNC Symbol;Acc:HGNC:9356]31271-0.838-0.5633Yes
91TUBA3Ctubulin alpha 3c [Source:HGNC Symbol;Acc:HGNC:12408]31315-0.852-0.5610Yes
92PGM2phosphoglucomutase 2 [Source:HGNC Symbol;Acc:HGNC:8906]31361-0.852-0.5587Yes
93MTHFD1methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:7432]31412-0.862-0.5565Yes
94ACTL6Aactin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]31415-0.862-0.5530Yes
95TOMM34translocase of outer mitochondrial membrane 34 [Source:HGNC Symbol;Acc:HGNC:15746]31437-0.871-0.5499Yes
96HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]31438-0.871-0.5464Yes
97AP1S2adaptor related protein complex 1 subunit sigma 2 [Source:HGNC Symbol;Acc:HGNC:560]31447-0.874-0.5430Yes
98EXOSC9exosome component 9 [Source:HGNC Symbol;Acc:HGNC:9137]31587-0.922-0.5429Yes
99LTBP2latent transforming growth factor beta binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6715]31659-0.948-0.5409Yes
100DCTPP1dCTP pyrophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:28777]31700-0.964-0.5381Yes
101POLR3KRNA polymerase III subunit K [Source:HGNC Symbol;Acc:HGNC:14121]31705-0.964-0.5342Yes
102COPS3COP9 signalosome subunit 3 [Source:HGNC Symbol;Acc:HGNC:2239]31807-0.992-0.5328Yes
103NDC1NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]31961-1.046-0.5327Yes
104CMC2C-X9-C motif containing 2 [Source:HGNC Symbol;Acc:HGNC:24447]32143-1.108-0.5330Yes
105CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]32153-1.113-0.5287Yes
106CCND3cyclin D3 [Source:HGNC Symbol;Acc:HGNC:1585]32269-1.156-0.5270Yes
107SLC25A11solute carrier family 25 member 11 [Source:HGNC Symbol;Acc:HGNC:10981]32450-1.233-0.5268Yes
108CDK5cyclin dependent kinase 5 [Source:HGNC Symbol;Acc:HGNC:1774]32456-1.235-0.5218Yes
109FAM216Afamily with sequence similarity 216 member A [Source:HGNC Symbol;Acc:HGNC:30180]32518-1.257-0.5183Yes
110PDCL3phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]32596-1.286-0.5151Yes
111YEATS4YEATS domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24859]32635-1.303-0.5107Yes
112LMNB2lamin B2 [Source:HGNC Symbol;Acc:HGNC:6638]32686-1.321-0.5066Yes
113SLF1SMC5-SMC6 complex localization factor 1 [Source:HGNC Symbol;Acc:HGNC:25408]32690-1.322-0.5013Yes
114FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.4958Yes
115UMPSuridine monophosphate synthetase [Source:HGNC Symbol;Acc:HGNC:12563]32733-1.341-0.4914Yes
116ZNF367zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]33388-1.551-0.5027Yes
117MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33403-1.555-0.4967Yes
118CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]33464-1.583-0.4918Yes
119ZWILCHzwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]33660-1.669-0.4902Yes
120HMGB1high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]33729-1.701-0.4850Yes
121MAZMYC associated zinc finger protein [Source:HGNC Symbol;Acc:HGNC:6914]33809-1.737-0.4800Yes
122CASP2caspase 2 [Source:HGNC Symbol;Acc:HGNC:1503]34041-1.850-0.4786Yes
123MT1Xmetallothionein 1X [Source:HGNC Symbol;Acc:HGNC:7405]34213-1.936-0.4753Yes
124KCNC4potassium voltage-gated channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:6236]34369-2.016-0.4711Yes
125MRASmuscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]34409-2.043-0.4638Yes
126UHRF1ubiquitin like with PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:HGNC:12556]34722-2.232-0.4630Yes
127ALKBH7alkB homolog 7 [Source:HGNC Symbol;Acc:HGNC:21306]34767-2.257-0.4549Yes
128GYS1glycogen synthase 1 [Source:HGNC Symbol;Acc:HGNC:4706]34798-2.281-0.4463Yes
129POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]34800-2.282-0.4369Yes
130GINS3GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]34907-2.355-0.4301Yes
131UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34921-2.364-0.4207Yes
132DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]34952-2.382-0.4117Yes
133SLC16A3solute carrier family 16 member 3 [Source:HGNC Symbol;Acc:HGNC:10924]35146-2.469-0.4067Yes
134CCDC34coiled-coil domain containing 34 [Source:HGNC Symbol;Acc:HGNC:25079]35271-2.565-0.3995Yes
135KATNAL1katanin catalytic subunit A1 like 1 [Source:HGNC Symbol;Acc:HGNC:28361]35287-2.582-0.3893Yes
136EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35359-2.639-0.3803Yes
137TUBG1tubulin gamma 1 [Source:HGNC Symbol;Acc:HGNC:12417]35448-2.698-0.3716Yes
138TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]35484-2.727-0.3613Yes
139CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35504-2.750-0.3505Yes
140PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35620-2.871-0.3417Yes
141MT1Lmetallothionein 1L, pseudogene [Source:HGNC Symbol;Acc:HGNC:7404]35657-2.900-0.3308Yes
142SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35789-2.981-0.3220Yes
143CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35792-2.983-0.3098Yes
144BHLHE40basic helix-loop-helix family member e40 [Source:HGNC Symbol;Acc:HGNC:1046]35837-3.017-0.2985Yes
145PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]35888-3.059-0.2873Yes
146CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]35964-3.144-0.2763Yes
147KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36079-3.255-0.2660Yes
148PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36205-3.402-0.2553Yes
149BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36250-3.453-0.2423Yes
150TCF19transcription factor 19 [Source:HGNC Symbol;Acc:HGNC:11629]36253-3.459-0.2281Yes
151NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36263-3.468-0.2140Yes
152ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36337-3.529-0.2015Yes
153RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36345-3.537-0.1871Yes
154MT1Hmetallothionein 1H [Source:HGNC Symbol;Acc:HGNC:7400]36348-3.540-0.1725Yes
155CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36464-3.673-0.1605Yes
156FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36503-3.702-0.1463Yes
157MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36607-3.868-0.1331Yes
158GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36625-3.903-0.1175Yes
159ITGA6integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]36632-3.907-0.1015Yes
160HIP1huntingtin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:4913]36788-4.112-0.0888Yes
161CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]36935-4.445-0.0744Yes
162FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36962-4.518-0.0565Yes
163TSPAN13tetraspanin 13 [Source:HGNC Symbol;Acc:HGNC:21643]37004-4.652-0.0384Yes
164S1PR1sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]37067-4.905-0.0198Yes
165FANCAFA complementation group A [Source:HGNC Symbol;Acc:HGNC:3582]37073-4.9550.0005Yes
Table: GSEA details [plain text format]



Fig 2: CSR_LATE_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_LATE_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for CSR_LATE_UP.V1_UP