Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.5765562
Normalized Enrichment Score (NES)1.5231634
Nominal p-value0.0
FDR q-value0.103096716
FWER p-Value0.082
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]104.9880.0408Yes
2LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]154.9810.0817Yes
3PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]324.9530.1220Yes
4ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]534.8740.1616Yes
5ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]674.8280.2010Yes
6MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]1114.5900.2376Yes
7TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]1354.4600.2737Yes
8OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]2384.0440.3042Yes
9IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]2414.0280.3373Yes
10TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2713.9230.3689Yes
11TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]3193.7190.3982Yes
12GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]4383.3910.4229Yes
13ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]4673.3010.4493Yes
14POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]4683.2930.4764Yes
15INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]6032.9900.4974Yes
16ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]6572.8840.5197Yes
17DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]10772.2270.5267Yes
18DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]11622.1250.5420Yes
19PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]18881.5100.5348Yes
20GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]20441.3930.5420Yes
21BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]21311.3350.5507Yes
22GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]22331.2810.5585Yes
23IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]22651.2560.5680Yes
24IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]23231.2260.5766Yes
25TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]29240.9310.5680No
26CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]33140.7750.5638No
27HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]36530.6510.5600No
28KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]40260.5300.5543No
29CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]46610.3250.5399No
30MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]52770.1530.5245No
31CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]62200.0000.4990No
32SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]63680.0000.4950No
33RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]70750.0000.4759No
34SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]70950.0000.4754No
35CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]79780.0000.4515No
36SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]80330.0000.4501No
37CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]86480.0000.4334No
38CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]87670.0000.4302No
39ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]98110.0000.4020No
40LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]103510.0000.3874No
41FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]103800.0000.3867No
42PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]108840.0000.3731No
43LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]109790.0000.3705No
44TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]111030.0000.3672No
45TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]114560.0000.3577No
46CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]116260.0000.3531No
47IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]117230.0000.3505No
48ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]118430.0000.3473No
49TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]124850.0000.3299No
50GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]125920.0000.3270No
51RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]127360.0000.3232No
52RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]128700.0000.3196No
53GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]130380.0000.3151No
54HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]131110.0000.3131No
55OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]133680.0000.3062No
56KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]135840.0000.3004No
57RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]137160.0000.2968No
58IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]137320.0000.2964No
59RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]138350.0000.2937No
60MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]142730.0000.2818No
61HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]143180.0000.2806No
62ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]147030.0000.2702No
63SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]153850.0000.2518No
64G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]157140.0000.2429No
65IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]157980.0000.2407No
66SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]158070.0000.2405No
67AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159020.0000.2379No
68MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]170860.0000.2059No
69GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]170880.0000.2059No
70SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]178320.0000.1858No
71CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]178590.0000.1851No
72IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]182160.0000.1754No
73BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190810.0000.1521No
74MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191130.0000.1512No
75NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194010.0000.1434No
76CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194680.0000.1417No
77CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194770.0000.1414No
78CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]194790.0000.1414No
79CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]194800.0000.1414No
80CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]194820.0000.1414No
81TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]197470.0000.1342No
82HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198060.0000.1327No
83GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]200090.0000.1272No
84NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200100.0000.1272No
85NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]206160.0000.1108No
86SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]206180.0000.1108No
87NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]207020.0000.1086No
88TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]208130.0000.1056No
89SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]212060.0000.0950No
90KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]212920.0000.0927No
91DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]214700.0000.0879No
92FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]214910.0000.0873No
93CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]215760.0000.0851No
94SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]217470.0000.0805No
95IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]217630.0000.0801No
96CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]218440.0000.0779No
97HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]219980.0000.0738No
98PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]221320.0000.0702No
99TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]224400.0000.0619No
100PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]225130.0000.0599No
101SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]226510.0000.0562No
102PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]227510.0000.0535No
103FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]230420.0000.0457No
104ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]236420.0000.0295No
105A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]242300.0000.0136No
106PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]247830.000-0.0014No
107PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]247890.000-0.0015No
108TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]251260.000-0.0106No
109MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]256000.000-0.0234No
110KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]268030.000-0.0559No
111CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]270170.000-0.0617No
112RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]271080.000-0.0641No
113NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]272400.000-0.0677No
114CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]272780.000-0.0687No
115CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]278970.000-0.0854No
116CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]279360.000-0.0864No
117ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]29468-0.353-0.1250No
118HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29862-0.443-0.1319No
119STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]29896-0.453-0.1291No
120RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]30060-0.500-0.1294No
121ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]30071-0.503-0.1255No
122NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]30692-0.656-0.1369No
123AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]30925-0.719-0.1373No
124CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]31063-0.771-0.1346No
125ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]31276-0.840-0.1335No
126FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]31357-0.852-0.1286No
127ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]31683-0.958-0.1295No
128LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]31902-1.026-0.1270No
129RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]31958-1.045-0.1199No
130SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]32829-1.385-0.1320No
131GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]33340-1.529-0.1332No
132KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]33882-1.769-0.1333No
133PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]33966-1.810-0.1207No
134ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35095-2.418-0.1313No
135SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35179-2.495-0.1130No
136ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]35521-2.761-0.0995No
137OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]35943-3.119-0.0852No
138KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]35954-3.134-0.0597No
139CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]36169-3.373-0.0377No
140KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36540-3.773-0.0166No
141KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]36576-3.8270.0139No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP