Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetMEL18_DN.V1_UP
Enrichment Score (ES)0.43451244
Normalized Enrichment Score (NES)1.1513156
Nominal p-value0.060240965
FDR q-value0.22751744
FWER p-Value0.812
Table: GSEA Results Summary



Fig 1: Enrichment plot: MEL18_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]154.9810.0243Yes
2VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]254.9630.0487Yes
3FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]764.7880.0711Yes
4PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]864.7390.0944Yes
5CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]1504.3820.1145Yes
6SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]1714.2770.1352Yes
7EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]1744.2650.1563Yes
8ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]1924.1930.1767Yes
9ZC3H12Azinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]2184.1030.1964Yes
10C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]2513.9790.2153Yes
11FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]2583.9640.2348Yes
12AGRNagrin [Source:HGNC Symbol;Acc:HGNC:329]3143.7490.2519Yes
13CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]3233.7060.2701Yes
14FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]3643.5640.2867Yes
15TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]3713.5460.3042Yes
16SPP1secreted phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11255]4523.3300.3185Yes
17CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]5153.1670.3326Yes
18IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]5693.0690.3464Yes
19INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]6032.9900.3603Yes
20PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]6092.9770.3750Yes
21TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]7842.6190.3833Yes
22CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]8882.5330.3931Yes
23MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]12402.0160.3936Yes
24GNB3G protein subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:4400]15371.8020.3945Yes
25SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]16361.7190.4004Yes
26NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]17141.6350.4064Yes
27SLC1A5solute carrier family 1 member 5 [Source:HGNC Symbol;Acc:HGNC:10943]18171.5600.4114Yes
28SLC2A6solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]19151.4990.4162Yes
29F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]22941.2430.4122Yes
30STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]23061.2360.4180Yes
31LPLlipoprotein lipase [Source:HGNC Symbol;Acc:HGNC:6677]23321.2140.4234Yes
32FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]25391.1260.4234Yes
33LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]25471.1210.4288Yes
34DDIT4DNA damage inducible transcript 4 [Source:HGNC Symbol;Acc:HGNC:24944]27231.0200.4291Yes
35SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]27531.0090.4333Yes
36SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]28850.9520.4345Yes
37GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]34390.7250.4231No
38TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]36340.6570.4212No
39HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]36530.6510.4239No
40VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]41900.4720.4117No
41EPHA2EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]42370.4510.4127No
42CTSScathepsin S [Source:HGNC Symbol;Acc:HGNC:2545]45380.3550.4064No
43VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]48780.2660.3985No
44COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]52360.1610.3897No
45HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]54070.1530.3858No
46KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]61300.0040.3663No
47FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]67320.0000.3500No
48ABLIM3actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]68800.0000.3461No
49GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]81060.0000.3129No
50TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]87380.0000.2958No
51VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]94020.0000.2779No
52TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]96750.0000.2705No
53PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]98000.0000.2672No
54ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]98110.0000.2669No
55ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]98130.0000.2669No
56PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]115810.0000.2190No
57TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]124690.0000.1950No
58TIE1tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]129470.0000.1821No
59P2RX5purinergic receptor P2X 5 [Source:HGNC Symbol;Acc:HGNC:8536]140450.0000.1524No
60LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]151220.0000.1233No
61TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]154130.0000.1155No
62COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]154270.0000.1151No
63C3orf52chromosome 3 open reading frame 52 [Source:HGNC Symbol;Acc:HGNC:26255]159570.0000.1008No
64COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]163930.0000.0890No
65TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]165950.0000.0836No
66GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]168350.0000.0771No
67CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]171380.0000.0690No
68CDCP1CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]172360.0000.0663No
69SRPX2sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]174730.0000.0599No
70MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]176360.0000.0556No
71MICBMHC class I polypeptide-related sequence B [Source:HGNC Symbol;Acc:HGNC:7091]176370.0000.0556No
72PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]178460.0000.0499No
73BDKRB2bradykinin receptor B2 [Source:HGNC Symbol;Acc:HGNC:1030]179350.0000.0475No
74CHST2carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]181050.0000.0430No
75HLA-DQA1major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]183770.0000.0356No
76CDH13cadherin 13 [Source:HGNC Symbol;Acc:HGNC:1753]187180.0000.0264No
77MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191100.0000.0159No
78FZD6frizzled class receptor 6 [Source:HGNC Symbol;Acc:HGNC:4044]192210.0000.0129No
79CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194770.0000.0060No
80MEOX1mesenchyme homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7013]203010.000-0.0163No
81CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]205210.000-0.0222No
82LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]207700.000-0.0289No
83KCNJ15potassium inwardly rectifying channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]209210.000-0.0330No
84CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]215760.000-0.0507No
85NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]217910.000-0.0565No
86WNT5BWnt family member 5B [Source:HGNC Symbol;Acc:HGNC:16265]218190.000-0.0572No
87CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]219250.000-0.0601No
88HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]219980.000-0.0620No
89PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]227510.000-0.0824No
90PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]228550.000-0.0851No
91ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]236340.000-0.1062No
92ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]236400.000-0.1063No
93SLCO2A1solute carrier organic anion transporter family member 2A1 [Source:HGNC Symbol;Acc:HGNC:10955]238230.000-0.1113No
94INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]250450.000-0.1443No
95CACNG4calcium voltage-gated channel auxiliary subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:1408]253380.000-0.1522No
96MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]256090.000-0.1595No
97SND1-IT1SND1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:24158]276430.000-0.2145No
98CCN4cellular communication network factor 4 [Source:HGNC Symbol;Acc:HGNC:12769]278710.000-0.2207No
99TGFBR3transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774]281630.000-0.2286No
100SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]29079-0.253-0.2521No
101SLC22A4solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]29113-0.264-0.2516No
102GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]29383-0.329-0.2573No
103GPR3G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:HGNC:4484]29545-0.372-0.2598No
104KCNN3potassium calcium-activated channel subfamily N member 3 [Source:HGNC Symbol;Acc:HGNC:6292]29989-0.478-0.2694No
105RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]30060-0.500-0.2688No
106STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]30170-0.531-0.2691No
107ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]30192-0.538-0.2670No
108ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]31270-0.838-0.2920No
109C2CD2C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]31856-1.008-0.3029No
110SLC6A9solute carrier family 6 member 9 [Source:HGNC Symbol;Acc:HGNC:11056]32673-1.316-0.3184No
111PLXNA1plexin A1 [Source:HGNC Symbol;Acc:HGNC:9099]32723-1.334-0.3131No
112ECM1extracellular matrix protein 1 [Source:HGNC Symbol;Acc:HGNC:3153]33154-1.529-0.3172No
113SLC16A6solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]33471-1.587-0.3178No
114C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]33741-1.708-0.3166No
115LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]33777-1.722-0.3090No
116TYRO3TYRO3 protein tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12446]33902-1.781-0.3035No
117CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]34232-1.946-0.3028No
118DDX11DEAD/H-box helicase 11 [Source:HGNC Symbol;Acc:HGNC:2736]34314-2.001-0.2950No
119JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]34589-2.143-0.2918No
120FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]34652-2.179-0.2827No
121KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]34711-2.225-0.2732No
122SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35179-2.495-0.2734No
123ENTPD6ectonucleoside triphosphate diphosphohydrolase 6 [Source:HGNC Symbol;Acc:HGNC:3368]35331-2.607-0.2646No
124ERO1Aendoplasmic reticulum oxidoreductase 1 alpha [Source:HGNC Symbol;Acc:HGNC:13280]35376-2.655-0.2526No
125ARL4CADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]35470-2.716-0.2416No
126ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]35526-2.770-0.2293No
127CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]35964-3.144-0.2256No
128PYGBglycogen phosphorylase B [Source:HGNC Symbol;Acc:HGNC:9723]35975-3.159-0.2101No
129TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]36044-3.242-0.1959No
130SUN2Sad1 and UNC84 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:14210]36076-3.251-0.1806No
131SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36122-3.318-0.1653No
132ABCC5ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]36254-3.460-0.1517No
133P3H3prolyl 3-hydroxylase 3 [Source:HGNC Symbol;Acc:HGNC:19318]36255-3.460-0.1345No
134NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]36463-3.670-0.1219No
135ITPR3inositol 1,4,5-trisphosphate receptor type 3 [Source:HGNC Symbol;Acc:HGNC:6182]36498-3.692-0.1045No
136ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36545-3.782-0.0869No
137LTBP4latent transforming growth factor beta binding protein 4 [Source:HGNC Symbol;Acc:HGNC:6717]36569-3.813-0.0686No
138ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36660-3.936-0.0515No
139CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36793-4.119-0.0346No
140CA12carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]36849-4.233-0.0151No
141STEAP3STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]36890-4.3480.0054No
Table: GSEA details [plain text format]



Fig 2: MEL18_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MEL18_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for MEL18_DN.V1_UP