Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetP53_DN.V2_UP
Enrichment Score (ES)0.44661802
Normalized Enrichment Score (NES)1.1596181
Nominal p-value0.08737864
FDR q-value0.22250077
FWER p-Value0.79
Table: GSEA Results Summary



Fig 1: Enrichment plot: P53_DN.V2_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]374.9380.0401Yes
2CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]854.7420.0782Yes
3MMP13matrix metallopeptidase 13 [Source:HGNC Symbol;Acc:HGNC:7159]1184.5500.1152Yes
4HAO1hydroxyacid oxidase 1 [Source:HGNC Symbol;Acc:HGNC:4809]2464.0100.1451Yes
5IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]2663.9400.1773Yes
6TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2713.9230.2098Yes
7LRRC32leucine rich repeat containing 32 [Source:HGNC Symbol;Acc:HGNC:4161]2953.8160.2410Yes
8CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]3233.7060.2710Yes
9NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]3303.6720.3014Yes
10OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]3873.4990.3290Yes
11CLCF1cardiotrophin like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]6912.8140.3442Yes
12FOSL2FOS like 2, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3798]7042.7770.3670Yes
13H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]9992.3370.3784Yes
14PTK2Bprotein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]10282.2820.3966Yes
15MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]10582.2600.4147Yes
16P2RY6pyrimidinergic receptor P2Y6 [Source:HGNC Symbol;Acc:HGNC:8543]13791.8670.4215Yes
17PRRG3proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]14431.8020.4348Yes
18IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]21401.3330.4270Yes
19SYN1synapsin I [Source:HGNC Symbol;Acc:HGNC:11494]22731.2530.4339Yes
20CH25Hcholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:HGNC:1907]22951.2430.4437Yes
21NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]25331.1280.4466Yes
22RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]35060.7060.4262No
23PRKCEprotein kinase C epsilon [Source:HGNC Symbol;Acc:HGNC:9401]36390.6550.4280No
24EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]39990.5370.4228No
25SDC4syndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]42290.4560.4204No
26TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]49250.2530.4037No
27GP5glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]49880.2340.4039No
28ITM2Aintegral membrane protein 2A [Source:HGNC Symbol;Acc:HGNC:6173]52300.1620.3988No
29TUBB1tubulin beta 1 class VI [Source:HGNC Symbol;Acc:HGNC:16257]56150.1530.3896No
30MPZmyelin protein zero [Source:HGNC Symbol;Acc:HGNC:7225]58790.0800.3832No
31CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]62200.0000.3740No
32FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]67310.0000.3602No
33PRDM11PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]67810.0000.3588No
34ANGPTL3angiopoietin like 3 [Source:HGNC Symbol;Acc:HGNC:491]68000.0000.3584No
35PPEF1protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]68390.0000.3573No
36C4BPAcomplement component 4 binding protein alpha [Source:HGNC Symbol;Acc:HGNC:1325]70470.0000.3517No
37PKD2L1polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]76720.0000.3348No
38GUCY2Dguanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]82700.0000.3187No
39GPA33glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]83920.0000.3154No
40BARX2BARX homeobox 2 [Source:HGNC Symbol;Acc:HGNC:956]84730.0000.3132No
41CDH4cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]93100.0000.2906No
42CLEC1AC-type lectin domain family 1 member A [Source:HGNC Symbol;Acc:HGNC:24355]93400.0000.2898No
43TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]96750.0000.2808No
44KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]97210.0000.2796No
45ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]98130.0000.2771No
46HS3ST2heparan sulfate-glucosamine 3-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:5195]98900.0000.2750No
47APOL3apolipoprotein L3 [Source:HGNC Symbol;Acc:HGNC:14868]99630.0000.2731No
48GSC2goosecoid homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4613]100530.0000.2707No
49SPRR2Csmall proline rich protein 2C (pseudogene) [Source:HGNC Symbol;Acc:HGNC:11263]100790.0000.2700No
50SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]100880.0000.2698No
51CYP2D6cytochrome P450 family 2 subfamily D member 6 [Source:HGNC Symbol;Acc:HGNC:2625]102070.0000.2666No
52IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]103020.0000.2641No
53RFPL2ret finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:9979]104240.0000.2608No
54NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]108600.0000.2490No
55GYPBglycophorin B (MNS blood group) [Source:HGNC Symbol;Acc:HGNC:4703]118080.0000.2234No
56NTSR1neurotensin receptor 1 [Source:HGNC Symbol;Acc:HGNC:8039]118160.0000.2232No
57ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]120740.0000.2162No
58LGSNlengsin, lens protein with glutamine synthetase domain [Source:HGNC Symbol;Acc:HGNC:21016]120850.0000.2160No
59TNRtenascin R [Source:HGNC Symbol;Acc:HGNC:11953]125350.0000.2038No
60AVPR2arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]125770.0000.2027No
61PCDHA6protocadherin alpha 6 [Source:HGNC Symbol;Acc:HGNC:8672]138720.0000.1677No
62ANXA10annexin A10 [Source:HGNC Symbol;Acc:HGNC:534]142260.0000.1581No
63TNNI3KTNNI3 interacting kinase [Source:HGNC Symbol;Acc:HGNC:19661]143850.0000.1538No
64SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]153850.0000.1268No
65HTR1E5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]154820.0000.1242No
66BPIbactericidal permeability increasing protein [Source:HGNC Symbol;Acc:HGNC:1095]155070.0000.1235No
67IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]155280.0000.1230No
68CA3carbonic anhydrase 3 [Source:HGNC Symbol;Acc:HGNC:1374]156090.0000.1208No
69AMELXamelogenin X-linked [Source:HGNC Symbol;Acc:HGNC:461]159010.0000.1130No
70FPR3formyl peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:3828]160060.0000.1101No
71RNF39ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]164610.0000.0979No
72DLX6distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919]167130.0000.0911No
73SLC38A3solute carrier family 38 member 3 [Source:HGNC Symbol;Acc:HGNC:18044]175160.0000.0693No
74CEACAM5CEA cell adhesion molecule 5 [Source:HGNC Symbol;Acc:HGNC:1817]178640.0000.0600No
75DPYSdihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]180570.0000.0548No
76CHST8carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]180840.0000.0541No
77BFSP2beaded filament structural protein 2 [Source:HGNC Symbol;Acc:HGNC:1041]181790.0000.0515No
78CXCL12C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]189180.0000.0315No
79ME3malic enzyme 3 [Source:HGNC Symbol;Acc:HGNC:6985]189240.0000.0314No
80MOGmyelin oligodendrocyte glycoprotein [Source:HGNC Symbol;Acc:HGNC:7197]190130.0000.0290No
81MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]191170.0000.0262No
82CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]194630.0000.0169No
83CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194680.0000.0168No
84CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194770.0000.0166No
85CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]194800.0000.0165No
86CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]194820.0000.0165No
87CYP17A1cytochrome P450 family 17 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2593]198040.0000.0078No
88CHRNA10cholinergic receptor nicotinic alpha 10 subunit [Source:HGNC Symbol;Acc:HGNC:13800]198080.0000.0077No
89PDCphosducin [Source:HGNC Symbol;Acc:HGNC:8759]199880.0000.0029No
90PTX3pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692]200860.0000.0002No
91FOXL2forkhead box L2 [Source:HGNC Symbol;Acc:HGNC:1092]205830.000-0.0132No
92CYP2A13cytochrome P450 family 2 subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:2608]206800.000-0.0158No
93EVX1even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]207280.000-0.0171No
94LALBAlactalbumin alpha [Source:HGNC Symbol;Acc:HGNC:6480]210170.000-0.0249No
95KCNMB1potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:6285]219480.000-0.0500No
96WNT3Wnt family member 3 [Source:HGNC Symbol;Acc:HGNC:12782]222030.000-0.0569No
97SLC4A10solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]226170.000-0.0681No
98PRTN3proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]228280.000-0.0738No
99RIPK4receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]229580.000-0.0773No
100OR10H3olfactory receptor family 10 subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:8174]229680.000-0.0775No
101POU2AF1POU class 2 homeobox associating factor 1 [Source:HGNC Symbol;Acc:HGNC:9211]236630.000-0.0963No
102MAGEC2MAGE family member C2 [Source:HGNC Symbol;Acc:HGNC:13574]239420.000-0.1038No
103PF4V1platelet factor 4 variant 1 [Source:HGNC Symbol;Acc:HGNC:8862]243680.000-0.1153No
104XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]245190.000-0.1194No
105PYYpeptide YY [Source:HGNC Symbol;Acc:HGNC:9748]248280.000-0.1277No
106RGRretinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]252270.000-0.1385No
107RHDRh blood group D antigen [Source:HGNC Symbol;Acc:HGNC:10009]252350.000-0.1387No
108CACNG2calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]253360.000-0.1414No
109MMP17matrix metallopeptidase 17 [Source:HGNC Symbol;Acc:HGNC:7163]256110.000-0.1488No
110SARDHsarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]256890.000-0.1509No
111TPTEtransmembrane phosphatase with tensin homology [Source:HGNC Symbol;Acc:HGNC:12023]258220.000-0.1545No
112P2RY11purinergic receptor P2Y11 [Source:HGNC Symbol;Acc:HGNC:8540]261880.000-0.1643No
113SLC15A2solute carrier family 15 member 2 [Source:HGNC Symbol;Acc:HGNC:10921]266630.000-0.1772No
114INSL3insulin like 3 [Source:HGNC Symbol;Acc:HGNC:6086]267020.000-0.1782No
115INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]267050.000-0.1782No
116KRT31keratin 31 [Source:HGNC Symbol;Acc:HGNC:6448]268050.000-0.1809No
117KRT14keratin 14 [Source:HGNC Symbol;Acc:HGNC:6416]268510.000-0.1821No
118H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]276790.000-0.2045No
119CTLA4cytotoxic T-lymphocyte associated protein 4 [Source:HGNC Symbol;Acc:HGNC:2505]276950.000-0.2049No
120CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]280150.000-0.2136No
121BAXBCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]28422-0.074-0.2239No
122PCDH1protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]29318-0.315-0.2456No
123SLC16A4solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]29570-0.378-0.2492No
124CNOT9CCR4-NOT transcription complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:10445]30524-0.613-0.2699No
125SLASrc like adaptor [Source:HGNC Symbol;Acc:HGNC:10902]30678-0.653-0.2686No
126RFX2regulatory factor X2 [Source:HGNC Symbol;Acc:HGNC:9983]31272-0.839-0.2777No
127FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]31357-0.852-0.2729No
128INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]31671-0.954-0.2734No
129NFIXnuclear factor I X [Source:HGNC Symbol;Acc:HGNC:7788]32303-1.176-0.2807No
130TDRKHtudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]32616-1.294-0.2784No
131CD68CD68 molecule [Source:HGNC Symbol;Acc:HGNC:1693]32634-1.303-0.2680No
132FZD9frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]32692-1.323-0.2586No
133CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]33322-1.529-0.2629No
134RORCRAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]33329-1.529-0.2503No
135CD5LCD5 molecule like [Source:HGNC Symbol;Acc:HGNC:1690]33755-1.711-0.2476No
136NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]33888-1.776-0.2364No
137PIDD1p53-induced death domain protein 1 [Source:HGNC Symbol;Acc:HGNC:16491]34684-2.201-0.2396No
138GALK1galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]35092-2.416-0.2306No
139ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35095-2.418-0.2105No
140EML3EMAP like 3 [Source:HGNC Symbol;Acc:HGNC:26666]35308-2.593-0.1947No
141ETV5ETS variant transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3494]35832-3.011-0.1838No
142DPF1double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225]35849-3.029-0.1591No
143OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]35943-3.119-0.1356No
144H6PDhexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]36157-3.358-0.1135No
145ALOX5AParachidonate 5-lipoxygenase activating protein [Source:HGNC Symbol;Acc:HGNC:436]36248-3.450-0.0872No
146RND2Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]36889-4.346-0.0684No
147POU6F1POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]36903-4.371-0.0324No
148TFAP4transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]36960-4.5050.0035No
Table: GSEA details [plain text format]



Fig 2: P53_DN.V2_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: P53_DN.V2_UP: Random ES distribution   
Gene set null distribution of ES for P53_DN.V2_UP