Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetHALLMARK_COAGULATION
Enrichment Score (ES)0.503513
Normalized Enrichment Score (NES)1.3058662
Nominal p-value0.009090909
FDR q-value0.06875604
FWER p-Value0.173
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_COAGULATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]234.9650.0346Yes
2TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]424.9050.0689Yes
3FBN1fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]614.8530.1028Yes
4CFBcomplement factor B [Source:HGNC Symbol;Acc:HGNC:1037]694.8140.1368Yes
5MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]1114.5900.1682Yes
6PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]1224.5200.2000Yes
7MMP14matrix metallopeptidase 14 [Source:HGNC Symbol;Acc:HGNC:7160]2154.1190.2267Yes
8SERPINE1serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583]2274.0650.2552Yes
9FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]2583.9640.2825Yes
10VWFvon Willebrand factor [Source:HGNC Symbol;Acc:HGNC:12726]3133.7500.3077Yes
11THBS1thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785]4883.2370.3259Yes
12SERPINC1serpin family C member 1 [Source:HGNC Symbol;Acc:HGNC:775]5643.0840.3457Yes
13CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]6062.9830.3658Yes
14MMP2matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166]6102.9740.3868Yes
15MSRB2methionine sulfoxide reductase B2 [Source:HGNC Symbol;Acc:HGNC:17061]6892.8190.4047Yes
16MAFFMAF bZIP transcription factor F [Source:HGNC Symbol;Acc:HGNC:6780]7212.7460.4233Yes
17PLEKpleckstrin [Source:HGNC Symbol;Acc:HGNC:9070]7272.7390.4426Yes
18F9coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]10852.2190.4487Yes
19GNG12G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]11572.1270.4618Yes
20C3complement C3 [Source:HGNC Symbol;Acc:HGNC:1318]11702.1180.4765Yes
21WDR1WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]12641.9860.4881Yes
22CD9CD9 molecule [Source:HGNC Symbol;Acc:HGNC:1709]18481.5390.4832Yes
23ANXA1annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]19851.4380.4897Yes
24F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]22941.2430.4902Yes
25CTSVcathepsin V [Source:HGNC Symbol;Acc:HGNC:2538]23741.1920.4965Yes
26ARF4ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]24221.1620.5035Yes
27F8coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]30180.8880.4937No
28FYNFYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:4037]31670.8370.4956No
29BMP1bone morphogenetic protein 1 [Source:HGNC Symbol;Acc:HGNC:1067]32460.8030.4992No
30ITIH1inter-alpha-trypsin inhibitor heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:6166]37350.6240.4904No
31ADAM9ADAM metallopeptidase domain 9 [Source:HGNC Symbol;Acc:HGNC:216]44580.3780.4736No
32RAC1Rac family small GTPase 1 [Source:HGNC Symbol;Acc:HGNC:9801]44720.3730.4759No
33GNB2G protein subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:4398]44890.3700.4781No
34PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]45660.3480.4785No
35LAMP2lysosomal associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:6501]49550.2430.4697No
36MASP2mannan binding lectin serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6902]49770.2370.4708No
37RABIFRAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]50210.2230.4712No
38KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]58120.1000.4506No
39CTSOcathepsin O [Source:HGNC Symbol;Acc:HGNC:2542]61400.0020.4417No
40ITGB3integrin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6156]61460.0000.4416No
41RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]64950.0000.4322No
42PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]98000.0000.3428No
43APOA1apolipoprotein A1 [Source:HGNC Symbol;Acc:HGNC:600]100210.0000.3368No
44APOC3apolipoprotein C3 [Source:HGNC Symbol;Acc:HGNC:610]100360.0000.3364No
45APOC2apolipoprotein C2 [Source:HGNC Symbol;Acc:HGNC:609]100380.0000.3364No
46APOC1apolipoprotein C1 [Source:HGNC Symbol;Acc:HGNC:607]100390.0000.3364No
47F13Bcoagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]107770.0000.3165No
48KLKB1kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]110590.0000.3089No
49TMPRSS6transmembrane serine protease 6 [Source:HGNC Symbol;Acc:HGNC:16517]114800.0000.2975No
50PROZprotein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]115290.0000.2962No
51PROCprotein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]115460.0000.2958No
52MST1macrophage stimulating 1 [Source:HGNC Symbol;Acc:HGNC:7380]123730.0000.2734No
53THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]125720.0000.2681No
54P2RY1purinergic receptor P2Y1 [Source:HGNC Symbol;Acc:HGNC:8539]140340.0000.2285No
55MBL2mannose binding lectin 2 [Source:HGNC Symbol;Acc:HGNC:6922]154980.0000.1889No
56C8Bcomplement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]155660.0000.1871No
57C8Acomplement C8 alpha chain [Source:HGNC Symbol;Acc:HGNC:1352]155670.0000.1871No
58C8Gcomplement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]155690.0000.1871No
59HTRA1HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]155940.0000.1864No
60CFDcomplement factor D [Source:HGNC Symbol;Acc:HGNC:2771]156740.0000.1843No
61CFIcomplement factor I [Source:HGNC Symbol;Acc:HGNC:5394]156750.0000.1843No
62DCTdopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2709]159320.0000.1774No
63C2complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]160080.0000.1754No
64C9complement C9 [Source:HGNC Symbol;Acc:HGNC:1358]160130.0000.1752No
65F2coagulation factor II, thrombin [Source:HGNC Symbol;Acc:HGNC:3535]160570.0000.1741No
66F10coagulation factor X [Source:HGNC Symbol;Acc:HGNC:3528]163680.0000.1657No
67F12coagulation factor XII [Source:HGNC Symbol;Acc:HGNC:3530]163690.0000.1657No
68F11coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]163700.0000.1657No
69FGAfibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]166080.0000.1593No
70FGGfibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694]166090.0000.1593No
71FN1fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]166550.0000.1581No
72OLR1oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133]166660.0000.1578No
73GP9glycoprotein IX platelet [Source:HGNC Symbol;Acc:HGNC:4444]170630.0000.1471No
74TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]170720.0000.1469No
75HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]174350.0000.1371No
76HNF4Ahepatocyte nuclear factor 4 alpha [Source:HGNC Symbol;Acc:HGNC:5024]176140.0000.1322No
77SERPING1serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]177380.0000.1289No
78SERPINA1serpin family A member 1 [Source:HGNC Symbol;Acc:HGNC:8941]177510.0000.1286No
79DPP4dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]179110.0000.1243No
80MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191100.0000.0919No
81MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191130.0000.0918No
82MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]191170.0000.0917No
83MMP8matrix metallopeptidase 8 [Source:HGNC Symbol;Acc:HGNC:7175]191230.0000.0916No
84PF4platelet factor 4 [Source:HGNC Symbol;Acc:HGNC:8861]200240.0000.0672No
85ACOX2acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]200550.0000.0664No
86MEP1Ameprin A subunit alpha [Source:HGNC Symbol;Acc:HGNC:7015]202430.0000.0614No
87GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]203050.0000.0597No
88CPB2carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]205020.0000.0544No
89CPN1carboxypeptidase N subunit 1 [Source:HGNC Symbol;Acc:HGNC:2312]206790.0000.0497No
90TFPI2tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]220480.0000.0126No
91CTSHcathepsin H [Source:HGNC Symbol;Acc:HGNC:2535]221400.0000.0102No
92PRSS23serine protease 23 [Source:HGNC Symbol;Acc:HGNC:14370]223320.0000.0050No
93ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]236420.000-0.0304No
94A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]242300.000-0.0463No
95SPARCsecreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]246030.000-0.0564No
96HMGCS23-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]247030.000-0.0590No
97PLGplasminogen [Source:HGNC Symbol;Acc:HGNC:9071]247360.000-0.0599No
98C1QAcomplement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]247950.000-0.0615No
99LEFTY2left-right determination factor 2 [Source:HGNC Symbol;Acc:HGNC:3122]249130.000-0.0646No
100RGNregucalcin [Source:HGNC Symbol;Acc:HGNC:9989]252210.000-0.0730No
101KLK8kallikrein related peptidase 8 [Source:HGNC Symbol;Acc:HGNC:6369]253680.000-0.0769No
102MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]256000.000-0.0832No
103MMP11matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]256040.000-0.0832No
104MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]256090.000-0.0833No
105F2RL2coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]259930.000-0.0937No
106PEF1penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]28655-0.141-0.1647No
107CTSBcathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]29649-0.401-0.1887No
108HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29862-0.443-0.1913No
109SIRT2sirtuin 2 [Source:HGNC Symbol;Acc:HGNC:10886]30128-0.518-0.1948No
110S100A13S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]30464-0.596-0.1997No
111CTSKcathepsin K [Source:HGNC Symbol;Acc:HGNC:2536]31226-0.822-0.2144No
112C1Rcomplement C1r [Source:HGNC Symbol;Acc:HGNC:1246]31235-0.824-0.2088No
113COMPcartilage oligomeric matrix protein [Source:HGNC Symbol;Acc:HGNC:2227]31521-0.904-0.2101No
114DUSP14dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]31853-1.008-0.2119No
115DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]31865-1.011-0.2051No
116ISCUiron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]31949-1.042-0.1999No
117GDAguanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]32624-1.298-0.2090No
118CAPN5calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]32815-1.378-0.2043No
119CASP9caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]32849-1.399-0.1953No
120CSRP1cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]32954-1.445-0.1879No
121SH2B2SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]33367-1.535-0.1881No
122C1Scomplement C1s [Source:HGNC Symbol;Acc:HGNC:1247]33542-1.617-0.1814No
123PROS1protein S [Source:HGNC Symbol;Acc:HGNC:9456]33687-1.684-0.1733No
124LTA4Hleukotriene A4 hydrolase [Source:HGNC Symbol;Acc:HGNC:6710]33735-1.703-0.1625No
125S100A1S100 calcium binding protein A1 [Source:HGNC Symbol;Acc:HGNC:10486]34192-1.927-0.1612No
126USP11ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]34327-2.007-0.1506No
127CAPN2calpain 2 [Source:HGNC Symbol;Acc:HGNC:1479]34436-2.055-0.1389No
128CRIP2cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]34530-2.111-0.1265No
129CTSEcathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]34720-2.232-0.1158No
130TFtransferrin [Source:HGNC Symbol;Acc:HGNC:11740]34740-2.247-0.1003No
131LRP1LDL receptor related protein 1 [Source:HGNC Symbol;Acc:HGNC:6692]34792-2.274-0.0856No
132LGMNlegumain [Source:HGNC Symbol;Acc:HGNC:9472]35824-3.007-0.0922No
133GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]35909-3.083-0.0726No
134ANGangiogenin [Source:HGNC Symbol;Acc:HGNC:483]36136-3.337-0.0550No
135PLAUplasminogen activator, urokinase [Source:HGNC Symbol;Acc:HGNC:9052]36283-3.494-0.0342No
136CPQcarboxypeptidase Q [Source:HGNC Symbol;Acc:HGNC:16910]36334-3.526-0.0106No
137CFHcomplement factor H [Source:HGNC Symbol;Acc:HGNC:4883]36904-4.3710.0050No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_COAGULATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_COAGULATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_COAGULATION