Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetHALLMARK_PEROXISOME
Enrichment Score (ES)-0.54640836
Normalized Enrichment Score (NES)-1.1433022
Nominal p-value0.19906868
FDR q-value0.5427921
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PEROXISOME   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CACNA1Bcalcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389]3273.6930.0180No
2SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]4603.3180.0385No
3ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:3433]5023.2050.0607No
4ATXN1ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]5233.1210.0828No
5PRDX5peroxiredoxin 5 [Source:HGNC Symbol;Acc:HGNC:9355]8522.5880.0928No
6TSPOtranslocator protein [Source:HGNC Symbol;Acc:HGNC:1158]10662.2390.1033No
7PRDX1peroxiredoxin 1 [Source:HGNC Symbol;Acc:HGNC:9352]14221.8150.1069No
8ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]15891.7710.1152No
9MVPmajor vault protein [Source:HGNC Symbol;Acc:HGNC:7531]15941.7650.1280No
10HSD17B11hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]16681.6720.1381No
11NUDT19nudix hydrolase 19 [Source:HGNC Symbol;Acc:HGNC:32036]18041.5680.1459No
12MLYCDmalonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]20621.3930.1490No
13ABCB9ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]27720.9990.1371No
14CNBPCCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]27950.9850.1437No
15VPS4Bvacuolar protein sorting 4 homolog B [Source:HGNC Symbol;Acc:HGNC:10895]28940.9470.1479No
16DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]31140.8630.1483No
17ACSL1acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]32590.8000.1502No
18ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit [Source:HGNC Symbol;Acc:HGNC:3435]33430.7630.1535No
19SLC27A2solute carrier family 27 member 2 [Source:HGNC Symbol;Acc:HGNC:10996]33470.7600.1589No
20CDK7cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]37470.6200.1527No
21YWHAHtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:HGNC Symbol;Acc:HGNC:12853]38040.6020.1555No
22BCL10BCL10 immune signaling adaptor [Source:HGNC Symbol;Acc:HGNC:989]41260.4940.1504No
23SLC25A19solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]41470.4880.1534No
24CLN8CLN8 transmembrane ER and ERGIC protein [Source:HGNC Symbol;Acc:HGNC:2079]46510.3270.1422No
25PEX5peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:HGNC:9719]47250.3080.1425No
26FIS1fission, mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:21689]48270.2790.1418No
27ACOT8acyl-CoA thioesterase 8 [Source:HGNC Symbol;Acc:HGNC:15919]50570.2130.1371No
28IDI1isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:HGNC:5387]51200.1960.1369No
29PEX14peroxisomal biogenesis factor 14 [Source:HGNC Symbol;Acc:HGNC:8856]59910.0420.1137No
30PEX13peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:HGNC:8855]60670.0210.1118No
31PABPC1poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554]61440.0010.1097No
32EPHX2epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402]77930.0000.0652No
33EHHADHenoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3247]78110.0000.0647No
34GSTK1glutathione S-transferase kappa 1 [Source:HGNC Symbol;Acc:HGNC:16906]95180.0000.0186No
35ESR2estrogen receptor 2 [Source:HGNC Symbol;Acc:HGNC:3468]119130.000-0.0461No
36STSsteroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]123180.000-0.0571No
37TTRtransthyretin [Source:HGNC Symbol;Acc:HGNC:12405]125830.000-0.0642No
38HSD11B2hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]143190.000-0.1111No
39CELcarboxyl ester lipase [Source:HGNC Symbol;Acc:HGNC:1848]156650.000-0.1475No
40DIO1iodothyronine deiodinase 1 [Source:HGNC Symbol;Acc:HGNC:2883]157240.000-0.1490No
41SERPINA6serpin family A member 6 [Source:HGNC Symbol;Acc:HGNC:1540]177560.000-0.2039No
42SEMA3Csemaphorin 3C [Source:HGNC Symbol;Acc:HGNC:10725]178290.000-0.2059No
43UGT2B17UDP glucuronosyltransferase family 2 member B17 [Source:HGNC Symbol;Acc:HGNC:12547]181630.000-0.2149No
44SULT2B1sulfotransferase family 2B member 1 [Source:HGNC Symbol;Acc:HGNC:11459]207850.000-0.2858No
45CRABP2cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]210760.000-0.2936No
46CRABP1cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]210770.000-0.2936No
47SCGB1A1secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]212680.000-0.2987No
48HAO2hydroxyacid oxidase 2 [Source:HGNC Symbol;Acc:HGNC:4810]219550.000-0.3173No
49ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]228600.000-0.3417No
50FABP6fatty acid binding protein 6 [Source:HGNC Symbol;Acc:HGNC:3561]240950.000-0.3751No
51ALBalbumin [Source:HGNC Symbol;Acc:HGNC:399]245170.000-0.3865No
52ABCC8ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]281540.000-0.4848No
53SLC23A2solute carrier family 23 member 2 [Source:HGNC Symbol;Acc:HGNC:10973]28452-0.081-0.4922No
54ITGB1BP1integrin subunit beta 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23927]28514-0.098-0.4931No
55PEX11Aperoxisomal biogenesis factor 11 alpha [Source:HGNC Symbol;Acc:HGNC:8852]28756-0.169-0.4984No
56RDH11retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]29234-0.298-0.5092No
57ISOC1isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]29599-0.387-0.5162No
58CTBP1C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]29623-0.396-0.5139No
59PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]29722-0.411-0.5136No
60ACSL5acyl-CoA synthetase long chain family member 5 [Source:HGNC Symbol;Acc:HGNC:16526]29729-0.412-0.5108No
61PEX2peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:HGNC:9717]29757-0.420-0.5085No
62SOD1superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]30358-0.568-0.5205No
63NR1I2nuclear receptor subfamily 1 group I member 2 [Source:HGNC Symbol;Acc:HGNC:7968]30752-0.672-0.5263No
64HRASHRas proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:5173]30836-0.689-0.5235No
65FDPSfarnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631]31645-0.943-0.5385No
66SIAH1siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]31938-1.038-0.5389Yes
67SLC25A17solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]31973-1.053-0.5321Yes
68ACOX1acyl-CoA oxidase 1 [Source:HGNC Symbol;Acc:HGNC:119]32086-1.102-0.5272Yes
69SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]32218-1.135-0.5225Yes
70IDEinsulin degrading enzyme [Source:HGNC Symbol;Acc:HGNC:5381]32241-1.143-0.5147Yes
71LONP2lon peptidase 2, peroxisomal [Source:HGNC Symbol;Acc:HGNC:20598]32326-1.186-0.5084Yes
72SLC25A4solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990]33031-1.478-0.5167Yes
73GNPATglyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]33053-1.489-0.5065Yes
74PEX11Bperoxisomal biogenesis factor 11 beta [Source:HGNC Symbol;Acc:HGNC:8853]33064-1.494-0.4959Yes
75ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]33066-1.494-0.4850Yes
76ABCD3ATP binding cassette subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:67]33408-1.558-0.4829Yes
77CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]33464-1.583-0.4729Yes
78HMGCL3-hydroxy-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]33794-1.729-0.4693Yes
79RXRGretinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479]33873-1.764-0.4586Yes
80CADM1cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]34002-1.830-0.4487Yes
81SCP2sterol carrier protein 2 [Source:HGNC Symbol;Acc:HGNC:10606]34326-2.006-0.4429Yes
82IDH2isocitrate dehydrogenase (NADP(+)) 2 [Source:HGNC Symbol;Acc:HGNC:5383]34442-2.058-0.4310Yes
83ACAA1acetyl-CoA acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:82]34560-2.126-0.4188Yes
84RETSATretinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]35081-2.410-0.4153Yes
85CATcatalase [Source:HGNC Symbol;Acc:HGNC:1516]35191-2.505-0.4001Yes
86ECI2enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]35257-2.555-0.3833Yes
87HSD17B4hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]35301-2.587-0.3656Yes
88CRATcarnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]35429-2.680-0.3496Yes
89ABCD1ATP binding cassette subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:61]35507-2.751-0.3317Yes
90ECH1enoyl-CoA hydratase 1 [Source:HGNC Symbol;Acc:HGNC:3149]35576-2.822-0.3130Yes
91SLC35B2solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]35588-2.834-0.2927Yes
92TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35635-2.889-0.2730Yes
93ALDH9A1aldehyde dehydrogenase 9 family member A1 [Source:HGNC Symbol;Acc:HGNC:412]35766-2.958-0.2550Yes
94DLG4discs large MAGUK scaffold protein 4 [Source:HGNC Symbol;Acc:HGNC:2903]35815-2.999-0.2345Yes
95FADS1fatty acid desaturase 1 [Source:HGNC Symbol;Acc:HGNC:3574]35847-3.028-0.2133Yes
96ELOVL5ELOVL fatty acid elongase 5 [Source:HGNC Symbol;Acc:HGNC:21308]35894-3.064-0.1923Yes
97DHCR2424-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:HGNC:2859]36037-3.234-0.1727Yes
98ABCC5ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]36254-3.460-0.1534Yes
99ABCB4ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]36265-3.472-0.1284Yes
100CLN6CLN6 transmembrane ER protein [Source:HGNC Symbol;Acc:HGNC:2077]36507-3.704-0.1080Yes
101IDH1isocitrate dehydrogenase (NADP(+)) 1 [Source:HGNC Symbol;Acc:HGNC:5382]36715-3.998-0.0846Yes
102HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]36742-4.042-0.0559Yes
103MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36776-4.085-0.0271Yes
104ABCD2ATP binding cassette subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:66]37064-4.8990.0007Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PEROXISOME   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PEROXISOME: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PEROXISOME