Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_LPS_versus_WT_NA.Nof1.cls
#WT_LPS_versus_WT_NA_repos
PhenotypeNof1.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetHALLMARK_UV_RESPONSE_UP
Enrichment Score (ES)0.37901843
Normalized Enrichment Score (NES)1.0136157
Nominal p-value0.33734939
FDR q-value0.42290422
FWER p-Value0.846
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_UV_RESPONSE_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LHX2LIM homeobox 2 [Source:HGNC Symbol;Acc:HGNC:6594]1394.4460.0179Yes
2MMP14matrix metallopeptidase 14 [Source:HGNC Symbol;Acc:HGNC:7160]2154.1190.0359Yes
3NR4A1nuclear receptor subfamily 4 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7980]2434.0230.0548Yes
4FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]2583.9640.0737Yes
5GCH1GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:4193]3213.7130.0901Yes
6NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]3303.6720.1078Yes
7IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]3513.6230.1249Yes
8JUNBJunB proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6205]3593.5930.1422Yes
9TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]3713.5460.1592Yes
10SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]4603.3180.1730Yes
11ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]5333.1060.1861Yes
12SQSTM1sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]5393.0980.2011Yes
13FOSBFosB proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3797]6792.8380.2111Yes
14LYNLYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6735]9252.4760.2166Yes
15BTG2BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]9302.4640.2285Yes
16STARD3StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]10172.3050.2374Yes
17SHOX2short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]10572.2600.2473Yes
18HLA-Fmajor histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]11422.1360.2554Yes
19HMOX1heme oxygenase 1 [Source:HGNC Symbol;Acc:HGNC:5013]12751.9770.2615Yes
20BCL2L11BCL2 like 11 [Source:HGNC Symbol;Acc:HGNC:994]12761.9750.2711Yes
21BTG1BTG anti-proliferation factor 1 [Source:HGNC Symbol;Acc:HGNC:1130]13061.9470.2798Yes
22SELENOWselenoprotein W [Source:HGNC Symbol;Acc:HGNC:10752]13071.9450.2893Yes
23IRF1interferon regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:6116]13381.9130.2978Yes
24DNAJA1DnaJ heat shock protein family (Hsp40) member A1 [Source:HGNC Symbol;Acc:HGNC:5229]13591.8880.3064Yes
25CHKAcholine kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]13731.8730.3152Yes
26ASNSasparagine synthetase (glutamine-hydrolyzing) [Source:HGNC Symbol;Acc:HGNC:753]14061.8320.3233Yes
27SULT1A1sulfotransferase family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:11453]14521.8020.3308Yes
28BIDBH3 interacting domain death agonist [Source:HGNC Symbol;Acc:HGNC:1050]14951.8020.3385Yes
29TFRCtransferrin receptor [Source:HGNC Symbol;Acc:HGNC:11763]15991.7590.3442Yes
30TMBIM6transmembrane BAX inhibitor motif containing 6 [Source:HGNC Symbol;Acc:HGNC:11723]20051.4190.3402Yes
31GLSglutaminase [Source:HGNC Symbol;Acc:HGNC:4331]22121.2950.3409Yes
32ALAS15'-aminolevulinate synthase 1 [Source:HGNC Symbol;Acc:HGNC:396]23631.1980.3427Yes
33CTSVcathepsin V [Source:HGNC Symbol;Acc:HGNC:2538]23741.1920.3482Yes
34PPIFpeptidylprolyl isomerase F [Source:HGNC Symbol;Acc:HGNC:9259]24121.1700.3529Yes
35GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]25901.0950.3535Yes
36CYB5Bcytochrome b5 type B [Source:HGNC Symbol;Acc:HGNC:24374]26291.0730.3577Yes
37YKT6YKT6 v-SNARE homolog [Source:HGNC Symbol;Acc:HGNC:16959]27271.0180.3600Yes
38GRINAglutamate ionotropic receptor NMDA type subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:4589]30040.8940.3569Yes
39SLC6A8solute carrier family 6 member 8 [Source:HGNC Symbol;Acc:HGNC:11055]30460.8740.3600Yes
40EIF5eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:HGNC:3299]31820.8260.3604Yes
41KLHDC3kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]33280.7710.3602Yes
42BTG3BTG anti-proliferation factor 3 [Source:HGNC Symbol;Acc:HGNC:1132]33360.7670.3638Yes
43AQP3aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]33390.7660.3674Yes
44PRKCDprotein kinase C delta [Source:HGNC Symbol;Acc:HGNC:9399]34580.7170.3677Yes
45CLCN2chloride voltage-gated channel 2 [Source:HGNC Symbol;Acc:HGNC:2020]35860.6770.3676Yes
46DNAJB1DnaJ heat shock protein family (Hsp40) member B1 [Source:HGNC Symbol;Acc:HGNC:5270]37750.6090.3655Yes
47FOSFos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]38240.5940.3671Yes
48BAK1BCL2 antagonist/killer 1 [Source:HGNC Symbol;Acc:HGNC:949]38900.5690.3681Yes
49CYB5R1cytochrome b5 reductase 1 [Source:HGNC Symbol;Acc:HGNC:13397]39020.5680.3705Yes
50SPRsepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]39050.5680.3733Yes
51HYAL2hyaluronidase 2 [Source:HGNC Symbol;Acc:HGNC:5321]39790.5440.3739Yes
52PRPF3pre-mRNA processing factor 3 [Source:HGNC Symbol;Acc:HGNC:17348]40890.5060.3734Yes
53RASGRP1RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]41820.4760.3733Yes
54PSMC3proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549]42400.4490.3739Yes
55TARS1threonyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:11572]42620.4430.3755Yes
56HNRNPUheterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]42660.4420.3776Yes
57FGF18fibroblast growth factor 18 [Source:HGNC Symbol;Acc:HGNC:3674]43220.4200.3781Yes
58GRPEL1GrpE like 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:19696]44360.3840.3769Yes
59STIP1stress induced phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11387]44640.3770.3780Yes
60DDX21DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]45010.3660.3789Yes
61CLTBclathrin light chain B [Source:HGNC Symbol;Acc:HGNC:2091]45590.3500.3790Yes
62RPN1ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]48700.2690.3719No
63MARK2microtubule affinity regulating kinase 2 [Source:HGNC Symbol;Acc:HGNC:3332]50370.2180.3685No
64CDO1cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]50970.2000.3679No
65CDC34cell division cycle 34, ubiqiutin conjugating enzyme [Source:HGNC Symbol;Acc:HGNC:1734]52330.1620.3650No
66ARRB2arrestin beta 2 [Source:HGNC Symbol;Acc:HGNC:712]52600.1540.3651No
67PLCL1phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]53730.1530.3628No
68WIZWIZ zinc finger [Source:HGNC Symbol;Acc:HGNC:30917]57650.1130.3527No
69APOMapolipoprotein M [Source:HGNC Symbol;Acc:HGNC:13916]66590.0000.3286No
70C4BPBcomplement component 4 binding protein beta [Source:HGNC Symbol;Acc:HGNC:1328]70480.0000.3181No
71NPTX2neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]72070.0000.3138No
72GPX3glutathione peroxidase 3 [Source:HGNC Symbol;Acc:HGNC:4555]93460.0000.2559No
73KCNH2potassium voltage-gated channel subfamily H member 2 [Source:HGNC Symbol;Acc:HGNC:6251]96350.0000.2481No
74ONECUT1one cut homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8138]96940.0000.2465No
75CYP1A1cytochrome P450 family 1 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2595]104900.0000.2250No
76NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]108600.0000.2150No
77MAPK8IP2mitogen-activated protein kinase 8 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6883]111260.0000.2078No
78IGFBP2insulin like growth factor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:5471]117240.0000.1917No
79MSX1msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]123860.0000.1738No
80CDKN1Ccyclin dependent kinase inhibitor 1C [Source:HGNC Symbol;Acc:HGNC:1786]125010.0000.1707No
81CDKN2Bcyclin dependent kinase inhibitor 2B [Source:HGNC Symbol;Acc:HGNC:1788]125260.0000.1700No
82TACR3tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]130940.0000.1547No
83HTR75-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]154180.0000.0918No
84CCKcholecystokinin [Source:HGNC Symbol;Acc:HGNC:1569]156430.0000.0857No
85GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]168350.0000.0535No
86PDLIM3PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767]177120.0000.0297No
87ICAM1intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344]182370.0000.0156No
88NKX2-5NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]192110.000-0.0108No
89CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]194800.000-0.0180No
90TCHHtrichohyalin [Source:HGNC Symbol;Acc:HGNC:11791]198670.000-0.0285No
91COL2A1collagen type II alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2200]199820.000-0.0316No
92EPCAMepithelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:11529]215680.000-0.0745No
93CHRNA5cholinergic receptor nicotinic alpha 5 subunit [Source:HGNC Symbol;Acc:HGNC:1959]218450.000-0.0820No
94FMO1flavin containing dimethylaniline monoxygenase 1 [Source:HGNC Symbol;Acc:HGNC:3769]244010.000-0.1511No
95RETret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]251650.000-0.1718No
96AP2S1adaptor related protein complex 2 subunit sigma 1 [Source:HGNC Symbol;Acc:HGNC:565]28476-0.089-0.2610No
97CEBPGCCAAT enhancer binding protein gamma [Source:HGNC Symbol;Acc:HGNC:1837]28894-0.208-0.2713No
98ATP6V1C1ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]28912-0.213-0.2707No
99HSPA13heat shock protein family A (Hsp70) member 13 [Source:HGNC Symbol;Acc:HGNC:11375]29137-0.270-0.2754No
100PDAP1PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]29205-0.289-0.2759No
101NUP58nucleoporin 58 [Source:HGNC Symbol;Acc:HGNC:20261]29315-0.314-0.2773No
102NXF1nuclear RNA export factor 1 [Source:HGNC Symbol;Acc:HGNC:8071]29455-0.349-0.2793No
103PPATphosphoribosyl pyrophosphate amidotransferase [Source:HGNC Symbol;Acc:HGNC:9238]29478-0.356-0.2782No
104STK25serine/threonine kinase 25 [Source:HGNC Symbol;Acc:HGNC:11404]29562-0.376-0.2786No
105CA2carbonic anhydrase 2 [Source:HGNC Symbol;Acc:HGNC:1373]29696-0.404-0.2802No
106ATP6V1FATPase H+ transporting V1 subunit F [Source:HGNC Symbol;Acc:HGNC:16832]29988-0.477-0.2858No
107TGFBRAP1transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]30014-0.486-0.2841No
108MGAT1alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7044]30189-0.537-0.2862No
109AMD1adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:457]30446-0.591-0.2903No
110PPP1R2protein phosphatase 1 regulatory inhibitor subunit 2 [Source:HGNC Symbol;Acc:HGNC:9288]30481-0.601-0.2883No
111FKBP4FKBP prolyl isomerase 4 [Source:HGNC Symbol;Acc:HGNC:3720]30707-0.660-0.2911No
112CDC5Lcell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]30768-0.678-0.2895No
113POLR2HRNA polymerase II subunit H [Source:HGNC Symbol;Acc:HGNC:9195]30844-0.692-0.2881No
114TUBA4Atubulin alpha 4a [Source:HGNC Symbol;Acc:HGNC:12407]30848-0.693-0.2848No
115POLE3DNA polymerase epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:13546]31100-0.781-0.2878No
116CNP2',3'-cyclic nucleotide 3' phosphodiesterase [Source:HGNC Symbol;Acc:HGNC:2158]31452-0.876-0.2930No
117EIF2S3eukaryotic translation initiation factor 2 subunit gamma [Source:HGNC Symbol;Acc:HGNC:3267]31510-0.899-0.2902No
118MRPL23mitochondrial ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10322]31556-0.912-0.2870No
119RXRBretinoid X receptor beta [Source:HGNC Symbol;Acc:HGNC:10478]31884-1.018-0.2909No
120AGO2argonaute RISC catalytic component 2 [Source:HGNC Symbol;Acc:HGNC:3263]32176-1.119-0.2933No
121CCND3cyclin D3 [Source:HGNC Symbol;Acc:HGNC:1585]32269-1.156-0.2902No
122MAOAmonoamine oxidase A [Source:HGNC Symbol;Acc:HGNC:6833]32312-1.180-0.2856No
123POLG2DNA polymerase gamma 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9180]32631-1.302-0.2878No
124SIGMAR1sigma non-opioid intracellular receptor 1 [Source:HGNC Symbol;Acc:HGNC:8157]32656-1.310-0.2821No
125E2F5E2F transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3119]32670-1.314-0.2760No
126FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32691-1.323-0.2701No
127BSGbasigin (Ok blood group) [Source:HGNC Symbol;Acc:HGNC:1116]32822-1.380-0.2669No
128SLC25A4solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990]33031-1.478-0.2654No
129ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]33066-1.494-0.2590No
130BMP2bone morphogenetic protein 2 [Source:HGNC Symbol;Acc:HGNC:1069]33167-1.529-0.2543No
131RHOBras homolog family member B [Source:HGNC Symbol;Acc:HGNC:668]33398-1.552-0.2529No
132PARP2poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]33412-1.560-0.2457No
133PRKACAprotein kinase cAMP-activated catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9380]33894-1.778-0.2501No
134TYRO3TYRO3 protein tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12446]33902-1.781-0.2416No
135NAT1N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7645]33997-1.828-0.2352No
136ALDOAaldolase, fructose-bisphosphate A [Source:HGNC Symbol;Acc:HGNC:414]34003-1.831-0.2264No
137IL6STinterleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]34202-1.930-0.2224No
138HSPA2heat shock protein family A (Hsp70) member 2 [Source:HGNC Symbol;Acc:HGNC:5235]34348-2.016-0.2165No
139ACAA1acetyl-CoA acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:82]34560-2.126-0.2119No
140SLC6A12solute carrier family 6 member 12 [Source:HGNC Symbol;Acc:HGNC:11045]34580-2.138-0.2020No
141CDK2cyclin dependent kinase 2 [Source:HGNC Symbol;Acc:HGNC:1771]34829-2.298-0.1975No
142RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]34864-2.323-0.1871No
143URODuroporphyrinogen decarboxylase [Source:HGNC Symbol;Acc:HGNC:12591]34919-2.363-0.1771No
144CASP3caspase 3 [Source:HGNC Symbol;Acc:HGNC:1504]34935-2.377-0.1659No
145ENO2enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]35052-2.392-0.1574No
146CREG1cellular repressor of E1A stimulated genes 1 [Source:HGNC Symbol;Acc:HGNC:2351]35112-2.426-0.1472No
147PPT1palmitoyl-protein thioesterase 1 [Source:HGNC Symbol;Acc:HGNC:9325]35210-2.523-0.1375No
148OLFM1olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]35389-2.666-0.1293No
149PTPRDprotein tyrosine phosphatase receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]35694-2.900-0.1234No
150DLG4discs large MAGUK scaffold protein 4 [Source:HGNC Symbol;Acc:HGNC:2903]35815-2.999-0.1121No
151TSTthiosulfate sulfurtransferase [Source:HGNC Symbol;Acc:HGNC:12388]35850-3.030-0.0982No
152CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36045-3.244-0.0877No
153DGAT1diacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2843]36099-3.282-0.0731No
154NPTXRneuronal pentraxin receptor [Source:HGNC Symbol;Acc:HGNC:7954]36298-3.495-0.0615No
155H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36567-3.812-0.0502No
156RAB27ARAB27A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9766]36769-4.077-0.0358No
157EPHX1epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]36918-4.410-0.0183No
158RRADRRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:HGNC Symbol;Acc:HGNC:10446]37021-4.7030.0019No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_UV_RESPONSE_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_UV_RESPONSE_UP: Random ES distribution   
Gene set null distribution of ES for HALLMARK_UV_RESPONSE_UP