Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCSR_EARLY_UP.V1_DN
Enrichment Score (ES)-0.67394984
Normalized Enrichment Score (NES)-1.4578819
Nominal p-value0.002259887
FDR q-value0.03993665
FWER p-Value0.216
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TRIM56tripartite motif containing 56 [Source:HGNC Symbol;Acc:HGNC:19028]5242.1350.0041No
2MINDY1MINDY lysine 48 deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:25648]5672.0540.0205No
3STAT2signal transducer and activator of transcription 2 [Source:HGNC Symbol;Acc:HGNC:11363]7481.7980.0310No
4IFIT2interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409]8511.6890.0427No
5GRHL1grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]12761.3200.0425No
6IP6K2inositol hexakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:17313]14311.2260.0488No
7LRIG2leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]26370.7370.0225No
8ZFP64ZFP64 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:15940]27030.7210.0269No
9APBB3amyloid beta precursor protein binding family B member 3 [Source:HGNC Symbol;Acc:HGNC:20708]30700.6230.0223No
10EIF4EBP3eukaryotic translation initiation factor 4E binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3290]34130.5400.0177No
11DENND11DENN domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29472]37260.4730.0133No
12DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]38780.4430.0130No
13ERAP2endoplasmic reticulum aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:29499]39660.4290.0143No
14ZNF585Bzinc finger protein 585B [Source:HGNC Symbol;Acc:HGNC:30948]44010.3480.0056No
15NR1H3nuclear receptor subfamily 1 group H member 3 [Source:HGNC Symbol;Acc:HGNC:7966]46390.3030.0017No
16ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]46860.2970.0030No
17SAGS-antigen visual arrestin [Source:HGNC Symbol;Acc:HGNC:10521]49760.244-0.0027No
18FBXO38F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]49950.241-0.0011No
19RNF20ring finger protein 20 [Source:HGNC Symbol;Acc:HGNC:10062]51150.223-0.0024No
20MAB21L1mab-21 like 1 [Source:HGNC Symbol;Acc:HGNC:6757]52410.205-0.0041No
21HSPG2heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]63930.021-0.0350No
22RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]68810.000-0.0482No
23DAAM2dishevelled associated activator of morphogenesis 2 [Source:HGNC Symbol;Acc:HGNC:18143]71490.000-0.0554No
24ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]79960.000-0.0783No
25PMS2P1PMS1 homolog 2, mismatch repair system component pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9123]81300.000-0.0819No
26TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]93090.000-0.1138No
27NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]96870.000-0.1240No
28GFRA1GDNF family receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4243]114140.000-0.1707No
29COL1A1collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]130280.000-0.2143No
30GSDMBgasdermin B [Source:HGNC Symbol;Acc:HGNC:23690]133330.000-0.2225No
31CDRT4CMT1A duplicated region transcript 4 [Source:HGNC Symbol;Acc:HGNC:14383]134980.000-0.2270No
32GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]135540.000-0.2285No
33NYNRINNYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]140860.000-0.2428No
34HOXA10homeobox A10 [Source:HGNC Symbol;Acc:HGNC:5100]144280.000-0.2521No
35STOX1storkhead box 1 [Source:HGNC Symbol;Acc:HGNC:23508]159700.000-0.2937No
36SLC7A14solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]163510.000-0.3040No
37SLC9A7solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]176080.000-0.3380No
38PAPLNpapilin, proteoglycan like sulfated glycoprotein [Source:HGNC Symbol;Acc:HGNC:19262]179480.000-0.3472No
39C14orf132chromosome 14 open reading frame 132 [Source:HGNC Symbol;Acc:HGNC:20346]179670.000-0.3477No
40IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]184830.000-0.3616No
41SULF1sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]218960.000-0.4539No
42ZNF33Azinc finger protein 33A [Source:HGNC Symbol;Acc:HGNC:13096]225950.000-0.4728No
43ZNF337zinc finger protein 337 [Source:HGNC Symbol;Acc:HGNC:15809]226010.000-0.4729No
44ZNF302zinc finger protein 302 [Source:HGNC Symbol;Acc:HGNC:13848]226460.000-0.4741No
45CYP2R1cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]228460.000-0.4795No
46CAVIN2caveolae associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10690]238510.000-0.5066No
47SNPHsyntaphilin [Source:HGNC Symbol;Acc:HGNC:15931]260580.000-0.5663No
48NSUN5P2NSUN5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16609]262560.000-0.5717No
49PLCD1phospholipase C delta 1 [Source:HGNC Symbol;Acc:HGNC:9060]263060.000-0.5730No
50XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]274830.000-0.6048No
51SLC25A46solute carrier family 25 member 46 [Source:HGNC Symbol;Acc:HGNC:25198]27794-0.014-0.6131No
52TENT5Cterminal nucleotidyltransferase 5C [Source:HGNC Symbol;Acc:HGNC:24712]27836-0.023-0.6140No
53ZFYVE1zinc finger FYVE-type containing 1 [Source:HGNC Symbol;Acc:HGNC:13180]28108-0.070-0.6207No
54ZNF500zinc finger protein 500 [Source:HGNC Symbol;Acc:HGNC:23716]28294-0.095-0.6249No
55CROCCP2CROCC pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:28170]28335-0.101-0.6251No
56LTN1listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]28347-0.102-0.6245No
57RABGAP1RAB GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:17155]28527-0.128-0.6283No
58MSRB1methionine sulfoxide reductase B1 [Source:HGNC Symbol;Acc:HGNC:14133]28638-0.141-0.6301No
59TFAP2Atranscription factor AP-2 alpha [Source:HGNC Symbol;Acc:HGNC:11742]28839-0.171-0.6340No
60ELMOD2ELMO domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28111]28969-0.180-0.6360No
61GTPBP8GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]28979-0.182-0.6346No
62TAF15TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]29101-0.198-0.6362No
63FBXO25F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]29121-0.201-0.6350No
64PAN2poly(A) specific ribonuclease subunit PAN2 [Source:HGNC Symbol;Acc:HGNC:20074]29351-0.231-0.6392No
65UBN2ubinuclein 2 [Source:HGNC Symbol;Acc:HGNC:21931]29600-0.264-0.6437No
66CC2D1Acoiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:HGNC:30237]29776-0.291-0.6459No
67ALDH3B2aldehyde dehydrogenase 3 family member B2 [Source:HGNC Symbol;Acc:HGNC:411]30509-0.402-0.6623No
68ARL4DADP ribosylation factor like GTPase 4D [Source:HGNC Symbol;Acc:HGNC:656]30872-0.462-0.6681No
69PDE5Aphosphodiesterase 5A [Source:HGNC Symbol;Acc:HGNC:8784]30962-0.474-0.6665No
70STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]30967-0.474-0.6626No
71STX16syntaxin 16 [Source:HGNC Symbol;Acc:HGNC:11431]31239-0.518-0.6655No
72TCAIMT cell activation inhibitor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25241]31392-0.548-0.6649No
73PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]31728-0.613-0.6687Yes
74KBTBD6kelch repeat and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:25340]31794-0.625-0.6651Yes
75PHIPpleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]31914-0.651-0.6628Yes
76DXOdecapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]32039-0.677-0.6603Yes
77ANKZF1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:25527]32292-0.717-0.6610Yes
78ABCC10ATP binding cassette subfamily C member 10 [Source:HGNC Symbol;Acc:HGNC:52]32388-0.744-0.6572Yes
79ADAMTSL4ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]32426-0.752-0.6518Yes
80USP33ubiquitin specific peptidase 33 [Source:HGNC Symbol;Acc:HGNC:20059]32600-0.797-0.6497Yes
81MOSPD2motile sperm domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28381]32813-0.851-0.6481Yes
82ALDH1L2aldehyde dehydrogenase 1 family member L2 [Source:HGNC Symbol;Acc:HGNC:26777]33022-0.906-0.6460Yes
83ATF7IPactivating transcription factor 7 interacting protein [Source:HGNC Symbol;Acc:HGNC:20092]33032-0.909-0.6385Yes
84ZNF467zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]33077-0.920-0.6318Yes
85ARRDC3arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]33170-0.946-0.6262Yes
86AKIP1A-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:1170]33626-1.066-0.6294Yes
87ACCS1-aminocyclopropane-1-carboxylate synthase homolog (inactive) [Source:HGNC Symbol;Acc:HGNC:23989]33642-1.074-0.6207Yes
88SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]33697-1.091-0.6128Yes
89HEBP2heme binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15716]33770-1.111-0.6052Yes
90PRRT2proline rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:30500]34069-1.213-0.6029Yes
91BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]34383-1.330-0.6000Yes
92YEATS2YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]34505-1.382-0.5915Yes
93DCP1Bdecapping mRNA 1B [Source:HGNC Symbol;Acc:HGNC:24451]34781-1.516-0.5860Yes
94LRIG3leucine rich repeats and immunoglobulin like domains 3 [Source:HGNC Symbol;Acc:HGNC:30991]34791-1.519-0.5732Yes
95DDX17DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]34800-1.524-0.5604Yes
96ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]34809-1.529-0.5476Yes
97NDUFAF7NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]35016-1.623-0.5393Yes
98NMT2N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]35047-1.643-0.5260Yes
99ACYP1acylphosphatase 1 [Source:HGNC Symbol;Acc:HGNC:179]35074-1.655-0.5126Yes
100ACBD4acyl-CoA binding domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23337]35095-1.664-0.4989Yes
101LDB1LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:6532]35114-1.675-0.4851Yes
102UFSP2UFM1 specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:25640]35292-1.785-0.4746Yes
103POLLDNA polymerase lambda [Source:HGNC Symbol;Acc:HGNC:9184]35318-1.803-0.4599Yes
104SIX1SIX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10887]35326-1.808-0.4446Yes
105CIRBPcold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]35438-1.880-0.4315Yes
106SIX5SIX homeobox 5 [Source:HGNC Symbol;Acc:HGNC:10891]35703-2.058-0.4211Yes
107MRI1methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]35768-2.103-0.4048Yes
108C2CD5C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]35885-2.206-0.3891Yes
109LRRK2leucine rich repeat kinase 2 [Source:HGNC Symbol;Acc:HGNC:18618]35903-2.221-0.3706Yes
110TXNIPthioredoxin interacting protein [Source:HGNC Symbol;Acc:HGNC:16952]35977-2.277-0.3531Yes
111ING4inhibitor of growth family member 4 [Source:HGNC Symbol;Acc:HGNC:19423]35989-2.284-0.3339Yes
112CKBcreatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]36117-2.400-0.3168Yes
113BBC3BCL2 binding component 3 [Source:HGNC Symbol;Acc:HGNC:17868]36210-2.489-0.2980Yes
114CDKN1Bcyclin dependent kinase inhibitor 1B [Source:HGNC Symbol;Acc:HGNC:1785]36227-2.509-0.2770Yes
115NATD1N-acetyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30770]36247-2.534-0.2558Yes
116NPHP3nephrocystin 3 [Source:HGNC Symbol;Acc:HGNC:7907]36345-2.638-0.2359Yes
117FZD2frizzled class receptor 2 [Source:HGNC Symbol;Acc:HGNC:4040]36408-2.708-0.2144Yes
118ZNF226zinc finger protein 226 [Source:HGNC Symbol;Acc:HGNC:13019]36418-2.725-0.1914Yes
119AMTaminomethyltransferase [Source:HGNC Symbol;Acc:HGNC:473]36505-2.851-0.1693Yes
120HBP1HMG-box transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:23200]36527-2.877-0.1453Yes
121MPPE1metallophosphoesterase 1 [Source:HGNC Symbol;Acc:HGNC:15988]36539-2.892-0.1209Yes
122SLC16A7solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]36566-2.936-0.0965Yes
123ELMOD3ELMO domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26158]36626-3.036-0.0721Yes
124OTUD1OTU deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:27346]36689-3.156-0.0468Yes
125WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36752-3.297-0.0203Yes
126FUT10fucosyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19234]36820-3.4450.0073Yes
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_DN