Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#WT_GAQ_versus_WT_NA.Nof1.cls
#WT_GAQ_versus_WT_NA_repos
PhenotypeNof1.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetRB_DN.V1_UP
Enrichment Score (ES)-0.69948506
Normalized Enrichment Score (NES)-1.4888672
Nominal p-value0.0
FDR q-value0.032917432
FWER p-Value0.116
Table: GSEA Results Summary



Fig 1: Enrichment plot: RB_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ID1inhibitor of DNA binding 1, HLH protein [Source:HGNC Symbol;Acc:HGNC:5360]164.7650.0299No
2MYCMYC proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7553]963.7120.0514No
3ST3GAL4ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]6371.9580.0492No
4IER2immediate early response 2 [Source:HGNC Symbol;Acc:HGNC:28871]6781.8950.0602No
5GCLMglutamate-cysteine ligase modifier subunit [Source:HGNC Symbol;Acc:HGNC:4312]7051.8520.0713No
6SLC7A7solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]8201.7170.0791No
7PLA2G6phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]9831.5430.0846No
8MDM2MDM2 proto-oncogene [Source:HGNC Symbol;Acc:HGNC:6973]10071.5230.0936No
9BTG2BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]10301.5070.1026No
10PRKAB1protein kinase AMP-activated non-catalytic subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:9378]16341.1140.0934No
11TGM1transglutaminase 1 [Source:HGNC Symbol;Acc:HGNC:11777]24060.8080.0777No
12PRKCEprotein kinase C epsilon [Source:HGNC Symbol;Acc:HGNC:9401]26580.7290.0755No
13NUDT5nudix hydrolase 5 [Source:HGNC Symbol;Acc:HGNC:8052]30840.6190.0680No
14POLD4DNA polymerase delta 4, accessory subunit [Source:HGNC Symbol;Acc:HGNC:14106]48140.2730.0229No
15GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]52120.2090.0135No
16SLC24A1solute carrier family 24 member 1 [Source:HGNC Symbol;Acc:HGNC:10975]53750.1820.0103No
17PALMDpalmdelphin [Source:HGNC Symbol;Acc:HGNC:15846]57690.1120.0004No
18NXT1nuclear transport factor 2 like export factor 1 [Source:HGNC Symbol;Acc:HGNC:15913]62900.039-0.0134No
19FXYD6FXYD domain containing ion transport regulator 6 [Source:HGNC Symbol;Acc:HGNC:4030]68630.000-0.0289No
20HES1hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]74100.000-0.0436No
21ARTNartemin [Source:HGNC Symbol;Acc:HGNC:727]76910.000-0.0512No
22FBP1fructose-bisphosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3606]84500.000-0.0717No
23TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]90570.000-0.0881No
24TNFRSF18TNF receptor superfamily member 18 [Source:HGNC Symbol;Acc:HGNC:11914]94450.000-0.0986No
25GRB7growth factor receptor bound protein 7 [Source:HGNC Symbol;Acc:HGNC:4567]100590.000-0.1152No
26PKHD1PKHD1 ciliary IPT domain containing fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]100610.000-0.1152No
27OVOL2ovo like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:15804]109030.000-0.1379No
28LYNX1Ly6/neurotoxin 1 [Source:HGNC Symbol;Acc:HGNC:29604]117100.000-0.1597No
29IL36RNinterleukin 36 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:15561]126770.000-0.1859No
30DDIT4LDNA damage inducible transcript 4 like [Source:HGNC Symbol;Acc:HGNC:30555]135500.000-0.2094No
31MANSC1MANSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25505]140320.000-0.2225No
32PCDH10protocadherin 10 [Source:HGNC Symbol;Acc:HGNC:13404]147330.000-0.2414No
33NOXO1NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]155120.000-0.2624No
34DCTdopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2709]161180.000-0.2788No
35SPOCK1SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]171280.000-0.3061No
36SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]197790.000-0.3777No
37TMEM54transmembrane protein 54 [Source:HGNC Symbol;Acc:HGNC:24143]202680.000-0.3909No
38TYRP1tyrosinase related protein 1 [Source:HGNC Symbol;Acc:HGNC:12450]219790.000-0.4372No
39SFRP1secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]237980.000-0.4864No
40SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]243430.000-0.5011No
41ALPK3alpha kinase 3 [Source:HGNC Symbol;Acc:HGNC:17574]252320.000-0.5251No
42DUOXA1dual oxidase maturation factor 1 [Source:HGNC Symbol;Acc:HGNC:26507]261390.000-0.5496No
43ADGRE1adhesion G protein-coupled receptor E1 [Source:HGNC Symbol;Acc:HGNC:3336]28078-0.065-0.6016No
44HEY2hes related family bHLH transcription factor with YRPW motif 2 [Source:HGNC Symbol;Acc:HGNC:4881]28412-0.113-0.6099No
45GNB1LG protein subunit beta 1 like [Source:HGNC Symbol;Acc:HGNC:4397]28913-0.179-0.6223No
46SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]29081-0.195-0.6256No
47ZSCAN22zinc finger and SCAN domain containing 22 [Source:HGNC Symbol;Acc:HGNC:4929]29830-0.299-0.6439No
48SULF2sulfatase 2 [Source:HGNC Symbol;Acc:HGNC:20392]30365-0.383-0.6559No
49ZW10zw10 kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13194]30798-0.446-0.6647No
50PLEKHA6pleckstrin homology domain containing A6 [Source:HGNC Symbol;Acc:HGNC:17053]30996-0.479-0.6670No
51BAZ1Bbromodomain adjacent to zinc finger domain 1B [Source:HGNC Symbol;Acc:HGNC:961]31026-0.483-0.6647No
52MAN1B1mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]31253-0.523-0.6675No
53EI24EI24 autophagy associated transmembrane protein [Source:HGNC Symbol;Acc:HGNC:13276]31293-0.528-0.6652No
54MRPL49mitochondrial ribosomal protein L49 [Source:HGNC Symbol;Acc:HGNC:1176]32000-0.670-0.6800No
55GAB3GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]32389-0.744-0.6858No
56ZFP30ZFP30 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:29555]32896-0.875-0.6939Yes
57AHCYadenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]32902-0.875-0.6885Yes
58IFT27intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626]33194-0.950-0.6903Yes
59PCBP2poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]33196-0.951-0.6843Yes
60ACOX3acyl-CoA oxidase 3, pristanoyl [Source:HGNC Symbol;Acc:HGNC:121]33205-0.952-0.6784Yes
61UCK1uridine-cytidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:14859]33229-0.958-0.6730Yes
62PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33869-1.141-0.6830Yes
63HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]33917-1.159-0.6769Yes
64AAASaladin WD repeat nucleoporin [Source:HGNC Symbol;Acc:HGNC:13666]33942-1.168-0.6701Yes
65NANSN-acetylneuraminate synthase [Source:HGNC Symbol;Acc:HGNC:19237]34093-1.225-0.6664Yes
66CRIP2cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]34134-1.233-0.6596Yes
67TIPINTIMELESS interacting protein [Source:HGNC Symbol;Acc:HGNC:30750]34166-1.241-0.6526Yes
68CTDSP1CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]34264-1.280-0.6470Yes
69LCMT1leucine carboxyl methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:17557]34288-1.289-0.6395Yes
70RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]34299-1.292-0.6315Yes
71STUB1STIP1 homology and U-box containing protein 1 [Source:HGNC Symbol;Acc:HGNC:11427]34356-1.317-0.6247Yes
72ADAadenosine deaminase [Source:HGNC Symbol;Acc:HGNC:186]34405-1.338-0.6174Yes
73MMGT1membrane magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:28100]34429-1.349-0.6095Yes
74SLC2A9solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]34455-1.362-0.6015Yes
75CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]34464-1.368-0.5930Yes
76MRE11MRE11 homolog, double strand break repair nuclease [Source:HGNC Symbol;Acc:HGNC:7230]34506-1.383-0.5853Yes
77PMS2PMS1 homolog 2, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9122]34579-1.416-0.5782Yes
78MRPL45mitochondrial ribosomal protein L45 [Source:HGNC Symbol;Acc:HGNC:16651]34601-1.426-0.5697Yes
79TIMELESStimeless circadian regulator [Source:HGNC Symbol;Acc:HGNC:11813]34720-1.484-0.5635Yes
80NUMBLNUMB like endocytic adaptor protein [Source:HGNC Symbol;Acc:HGNC:8061]34834-1.540-0.5567Yes
81DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]34946-1.592-0.5496Yes
82PLXNB2plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]35218-1.733-0.5459Yes
83TKFCtriokinase and FMN cyclase [Source:HGNC Symbol;Acc:HGNC:24552]35232-1.740-0.5352Yes
84TUBG1tubulin gamma 1 [Source:HGNC Symbol;Acc:HGNC:12417]35387-1.846-0.5276Yes
85PDXPpyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]35515-1.921-0.5188Yes
86PEX11Bperoxisomal biogenesis factor 11 beta [Source:HGNC Symbol;Acc:HGNC:8853]35591-1.982-0.5083Yes
87SIVA1SIVA1 apoptosis inducing factor [Source:HGNC Symbol;Acc:HGNC:17712]35734-2.079-0.4989Yes
88PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35841-2.163-0.4880Yes
89NME4NME/NM23 nucleoside diphosphate kinase 4 [Source:HGNC Symbol;Acc:HGNC:7852]35844-2.164-0.4743Yes
90SPICE1spindle and centriole associated protein 1 [Source:HGNC Symbol;Acc:HGNC:25083]35849-2.171-0.4606Yes
91RAD51CRAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820]35888-2.209-0.4475Yes
92TPRA1transmembrane protein adipocyte associated 1 [Source:HGNC Symbol;Acc:HGNC:30413]35901-2.221-0.4337Yes
93UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]35946-2.255-0.4206Yes
94PPM1Mprotein phosphatase, Mg2+/Mn2+ dependent 1M [Source:HGNC Symbol;Acc:HGNC:26506]35988-2.283-0.4072Yes
95SLC35B2solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]36070-2.353-0.3944Yes
96GANCglucosidase alpha, neutral C [Source:HGNC Symbol;Acc:HGNC:4139]36075-2.357-0.3795Yes
97DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]36085-2.362-0.3647Yes
98STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36140-2.423-0.3508Yes
99BBC3BCL2 binding component 3 [Source:HGNC Symbol;Acc:HGNC:17868]36210-2.489-0.3368Yes
100RPA1replication protein A1 [Source:HGNC Symbol;Acc:HGNC:10289]36262-2.559-0.3219Yes
101VPS16VPS16 core subunit of CORVET and HOPS complexes [Source:HGNC Symbol;Acc:HGNC:14584]36283-2.578-0.3060Yes
102DNASE1L1deoxyribonuclease 1 like 1 [Source:HGNC Symbol;Acc:HGNC:2957]36294-2.585-0.2898Yes
103POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]36337-2.628-0.2743Yes
104RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36366-2.659-0.2581Yes
105DCXRdicarbonyl and L-xylulose reductase [Source:HGNC Symbol;Acc:HGNC:18985]36400-2.699-0.2418Yes
106THRAthyroid hormone receptor alpha [Source:HGNC Symbol;Acc:HGNC:11796]36449-2.775-0.2255Yes
107RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36558-2.916-0.2098Yes
108DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36592-2.977-0.1918Yes
109MSH6mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]36610-3.004-0.1731Yes
110MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36621-3.032-0.1541Yes
111MAPK13mitogen-activated protein kinase 13 [Source:HGNC Symbol;Acc:HGNC:6875]36730-3.253-0.1363Yes
112PMM1phosphomannomutase 1 [Source:HGNC Symbol;Acc:HGNC:9114]36775-3.349-0.1162Yes
113MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36788-3.371-0.0951Yes
114CLN6CLN6 transmembrane ER protein [Source:HGNC Symbol;Acc:HGNC:2077]36854-3.536-0.0743Yes
115CCNE2cyclin E2 [Source:HGNC Symbol;Acc:HGNC:1590]36979-3.954-0.0525Yes
116SLC2A8solute carrier family 2 member 8 [Source:HGNC Symbol;Acc:HGNC:13812]37042-4.336-0.0266Yes
117EPHX1epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]37051-4.3860.0011Yes
Table: GSEA details [plain text format]



Fig 2: RB_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: RB_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for RB_DN.V1_UP