STAR version=2.7.10a
STAR compilation time,server,dir=2022-01-14T18:50:00-05:00 :/home/dobin/data/STAR/STARcode/STAR.master/source
STAR git: On branch master ; commit ae26add7ea1724f3281ec8abedb71bcff6a4ae73 ; diff files: CHANGES.md README.md RELEASEnotes.md doc/STARmanual.pdf extras/doc-latex/STARmanual.tex extras/doc-latex/convertParDefToLatexTable.awk extras/doc-latex/parametersDefault.tex extras/docker/Dockerfile source/VERSION 
##### Command Line:
STAR --genomeDir /home/sharan/genome_indexes/hg38/star --runThreadN 8 --readFilesIn data/PR1_R1.fastq.gz data/PR1_R2.fastq.gz --outFileNamePrefix analysis/PR1/star
##### Initial USER parameters from Command Line:
outFileNamePrefix                 analysis/PR1/star
###### All USER parameters from Command Line:
genomeDir                     /home/sharan/genome_indexes/hg38/star     ~RE-DEFINED
runThreadN                    8     ~RE-DEFINED
readFilesIn                   data/PR1_R1.fastq.gz   data/PR1_R2.fastq.gz        ~RE-DEFINED
outFileNamePrefix             analysis/PR1/star     ~RE-DEFINED
##### Finished reading parameters from all sources

##### Final user re-defined parameters-----------------:
runThreadN                        8
genomeDir                         /home/sharan/genome_indexes/hg38/star
readFilesIn                       data/PR1_R1.fastq.gz   data/PR1_R2.fastq.gz   
outFileNamePrefix                 analysis/PR1/star

-------------------------------
##### Final effective command line:
STAR   --runThreadN 8   --genomeDir /home/sharan/genome_indexes/hg38/star   --readFilesIn data/PR1_R1.fastq.gz   data/PR1_R2.fastq.gz      --outFileNamePrefix analysis/PR1/star
----------------------------------------

Number of fastq files for each mate = 1
ParametersSolo: --soloCellFilterType CellRanger2.2 filtering parameters:  3000 0.99 10
Finished loading and checking parameters
Reading genome generation parameters:
### STAR   --runMode genomeGenerate   --runThreadN 8   --genomeDir /project/shefflab/deploy/rg.databio.org_full/genomes/data/2230c535660fb4774114bfa966a62f823fdb6d21acf138d4/star_index/default   --genomeFastaFiles /project/shefflab/deploy/rg.databio.org_full/genomes/data/2230c535660fb4774114bfa966a62f823fdb6d21acf138d4/fasta/default/2230c535660fb4774114bfa966a62f823fdb6d21acf138d4.fa   
### GstrandBit=32
versionGenome                 2.7.1a     ~RE-DEFINED
genomeFastaFiles              /project/shefflab/deploy/rg.databio.org_full/genomes/data/2230c535660fb4774114bfa966a62f823fdb6d21acf138d4/fasta/default/2230c535660fb4774114bfa966a62f823fdb6d21acf138d4.fa        ~RE-DEFINED
genomeSAindexNbases           14     ~RE-DEFINED
genomeChrBinNbits             18     ~RE-DEFINED
genomeSAsparseD               1     ~RE-DEFINED
sjdbOverhang                  0     ~RE-DEFINED
sjdbFileChrStartEnd           -        ~RE-DEFINED
sjdbGTFfile                   -     ~RE-DEFINED
sjdbGTFchrPrefix              -     ~RE-DEFINED
sjdbGTFfeatureExon            exon     ~RE-DEFINED
sjdbGTFtagExonParentTranscripttranscript_id     ~RE-DEFINED
sjdbGTFtagExonParentGene      gene_id     ~RE-DEFINED
sjdbInsertSave                Basic     ~RE-DEFINED
genomeFileSizes               3138650112   24212730724        ~RE-DEFINED

EXITING because of FATAL ERROR: Genome version: 2.7.1a is INCOMPATIBLE with running STAR version: 2.7.10a
SOLUTION: please re-generate genome from scratch with running version of STAR, or with version: 2.7.4a

Nov 09 12:06:11 ...... FATAL ERROR, exiting