#!/bin/bash

# cd /home/malhusayan/workdir/NGSWEB/ucsc/trackhubs/Asangani_Lab/CUTANA/Reyaz/PP2A/hg19

# for chip in B56 PP2AA PP2AC ; do
#     for treat in DMSO DT061; do
#         ln -sf /media/WORK1/CUTANA/Reyaz/alignment-and-assembly/${chip}_${treat}_1/BIGWIG/Aligned.out.primary.rmdup.sorted.bw ./${chip}_${treat}_1.bw
#         ln -sf /media/WORK1/CUTANA/Reyaz/alignment-and-assembly/${chip}_${treat}_2/BIGWIG/Aligned.out.primary.rmdup.sorted.bw ./${chip}_${treat}_2.bw
#     done
# done

for file in /media/WORK2/CutAndRun/Shweta/pre-analysis/*/Bigwig/*; do
    name=`echo ${file} | cut -d/ -f7`
    echo $name
    ln -sf ${file} /home/malhusayan/workdir/Media/data1/NGS-serve-folder/ucsc/trackhubs/Asangani_Lab/CUTANA/Shweta/NSD2/hg19/
done